| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3949 |
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| Symbol | |
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| ID | 4312845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 844921 |
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| End bp | 846174 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151791 |
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| Product | major facilitator transporter |
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| Protein accession | YP_775837 |
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| Protein GI | 115358699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0881757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCC CTGCGATTCC GCCCGCCGCG ACCCGCGTCC CGAACGCCAC GCCCGATGCG
CTGCCCGCCG GCGTGTCGCC GCGATCCGCG GCCTACAAGC GCATCGCGCT GGCGCTGTTC
CTGGCCGGCT TTTCCACCTT CTCGCTGCTG TATTGCGTCC AGCCTTTGCT GCCCGCGTTC
GCGCGCGAGT TCCATATCGG CGCGGCGTCG AGCTCGCTGT CCCTGTCACT GTCGACCGGG
CTGCTGGCGG TCTCGATCCT GTGCGCGGGC GCGCTGTCCG AACGCGTCGG GCGGCGCGGG
CTGATGTTCG CGTCGATGAC GCTGGCCGCG CTGTTCAACG TGCTGGCGGC GATTTCGCCG
AACTGGAACC TGCTGCTGAT CTGGCGCGCG CTCGAAGGTT TCGCGCTCGG CGGCGTTCCG
GCCGTGGCGA TGGCCTATCT TGCCGAGGAA ATCGCGCCCG ACGGGCTCGG GCTGTCGATG
GGGCTCTACG TCGGCGGCAC CGCGTTCGGC GGCATGGTCG GGCGGATCGG GATGAGCGCG
CTCGAAGAGT ACTTCTCGTG GCGCACCGCG ATGCTGACGA TCGGCGTCGT CGACCTCGTC
GCGGCGATCG CATTCGTGAT GCTGCTGCCG CAGTCGCGGC GCTTCGTGAA GCGAACCGAC
CTGACGCTGC GCCATCACCT GCGGCTATGG AACGCGCAAC TGCATCACGC GCGGCTTCCG
TTCGTGTTCG CGATCGGCTT TCTCGTGATG GGCTCGTTCG TGACGGTGTA CAACTACGCC
GCGTTCCGGC TGACGGCCGC GCCGTTCAAC CTGAGCGCGA CCGCGTGCGG GCTGATCTTC
GGCGCCTACC TGTTCGGGAT GGTGTCGTCG TCGAGCGCGG GCGCCCTCGC CGATCGGCTC
GGGCGCGCAC CCGTCCTCGT CAGCGGCATT CTCGTGTTCG CGGCCGGTCT CGCGCTGACG
CTGTCGCATT CGCTCGTCGC GATCATCGTC GGGATCGTGC TGATCACGAT CGGCTTCTTC
GTCGCCCATG CGGTCGCGAG CGGCTGGGTC GGGCACCTTG CCGGATCGGC GAAGGGGCAC
GCCGCGTCGC TGTATCTGCT GGCCTATTAC CTCGGATCGA GCGTGCTGGG TTCGGCCGGC
GGCACGGTGT GGCAGCACGG CGCATGGGGT GCGGTGGTCG CATATGTCGC GGTGTTACTC
GCATTGAGCC TGGTGGCCGC GCGCCGGATC ATTCGCGCGG AACGCGTGCG GTAA
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| Protein sequence | MSSPAIPPAA TRVPNATPDA LPAGVSPRSA AYKRIALALF LAGFSTFSLL YCVQPLLPAF
AREFHIGAAS SSLSLSLSTG LLAVSILCAG ALSERVGRRG LMFASMTLAA LFNVLAAISP
NWNLLLIWRA LEGFALGGVP AVAMAYLAEE IAPDGLGLSM GLYVGGTAFG GMVGRIGMSA
LEEYFSWRTA MLTIGVVDLV AAIAFVMLLP QSRRFVKRTD LTLRHHLRLW NAQLHHARLP
FVFAIGFLVM GSFVTVYNYA AFRLTAAPFN LSATACGLIF GAYLFGMVSS SSAGALADRL
GRAPVLVSGI LVFAAGLALT LSHSLVAIIV GIVLITIGFF VAHAVASGWV GHLAGSAKGH
AASLYLLAYY LGSSVLGSAG GTVWQHGAWG AVVAYVAVLL ALSLVAARRI IRAERVR
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