| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3948 |
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| Symbol | |
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| ID | 4312844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 843896 |
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| End bp | 844771 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151790 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_775836 |
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| Protein GI | 115358698 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.19042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTC GGCATCTCCG ATACTTTCTG GCCGTGGCCG CCACGTCGAA CTTCACGAAG
GCCGCGGAAA CGCTCGGCAT GGGGCAGCCG CCGCTGAGCC AGCAAATCAA GGCGCTCGAA
AGCGAACTCG GCGTGGAACT GTTCAAGCGG ACCGCGCGCG GCGCCGAACT GACCGTCGCC
GGCGAGGTGT TCGCGGAAGA GGCGCGGCGC GTGCTCGACG ATGCCGAGCG CGCGGCACGC
GCGGCAAAGC GGGCCGCGCG CGGGGAAATC GGGCAGCTTC GCGTGGGTTT TACCGGCACG
GCGGCGTTCA ATTCGAAAGT GGCCGACCTG ATTCGCCGCT TTCGCGAAGC GTTTCCGGAC
GCCGAGCTGA CGTTGCAGGA GGCGACCTCC GGCGTGCTGC TCGAGGCGCT GGAGGCCGGG
CGGCTCGATG TCGCGATCGT GCGCCCCGAG CGGCGTATCG CCGACACGTT GGTGGGGGCG
GACTGGGACG AGGAACCGAT GTTCGTCGCG TTGCCGGTCG CGCATCGGCT CGCGCAGCGG
CGCCGGATCG ATCTGGCGGA GCTGACCGAC GAAGCATTCG TGCAGGTGCC GCGCGAAGCC
GGCAGCGCGC TGTTCGACGA CATCGTCGCC GCGTGCAATG CCGCCGGGTT TCAACCGCGC
ATGGCGCAGC CCGCGCCGCA GATCACGTCC GCGGTGACGC TCGTCGCGGC CGGGCTCGGC
GTGTCGATCG TGCCGAAGGC GATCACGCAG GTGCAGGTCG CGGGCGTCGT GTATCGGCCG
GTCGCCGGCG ATGGTTTGCG CGCGAGGCTC GCGATCGCGT CGCGACGCGA TGATCCGTCC
GCGGTCGTGC GCAATTTTCT GGCGCTAGCG TGGTAG
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| Protein sequence | MELRHLRYFL AVAATSNFTK AAETLGMGQP PLSQQIKALE SELGVELFKR TARGAELTVA
GEVFAEEARR VLDDAERAAR AAKRAARGEI GQLRVGFTGT AAFNSKVADL IRRFREAFPD
AELTLQEATS GVLLEALEAG RLDVAIVRPE RRIADTLVGA DWDEEPMFVA LPVAHRLAQR
RRIDLAELTD EAFVQVPREA GSALFDDIVA ACNAAGFQPR MAQPAPQITS AVTLVAAGLG
VSIVPKAITQ VQVAGVVYRP VAGDGLRARL AIASRRDDPS AVVRNFLALA W
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