| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3947 |
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| Symbol | |
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| ID | 4312843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 842010 |
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| End bp | 843635 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638151789 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_775835 |
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| Protein GI | 115358697 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.889809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTCGCC AGACGCTTGC TCGCGCCGTG CTTCGCACCG CGTTGATCGG GGGCGTATTC
GCCGGCATTT TGTCGTCGTC GCCGCCCACC CGTGCCGGGA CCGTCGCGAC GCCCGCCCCA
CCGCCTGTCA TGAAAAGCAG GCCCGCCACA CGCGCTTACT CGATGCCGGT CGACTTTCCG
GCGATCGTCG ACCGCTACGG CCCGGCGGTC GTGACCATCA TGACCACCGG CCCCGACCAG
CAGCCCGGTG GCCCCGCCTT CGCGATCCTC GAACCCGACG ATCCGCTCAC CGGGTTCTTC
CGCCGCGGCG CGCAGCCGCC TGCGCCCCCG CCTCCGCTCA TGCCCGGGCA GGGCCCGCAG
GCGCCGTTGC CCGATACGTC GCCGCGCGCG ATCGCGGGCA GCGGCTCGGG CTTCATCGTC
AGCCCCGACG GGCTGATCCT GACGTCTGCG CATATCGTCG CCGACGCGAC CGACGTGACG
GTGCGACTGG CCGATCGTCG TGACCTGAAG GCGACGGTGC TGGCCGTCGA TCCGCAGAGC
GACGTCGCGG TGCTGCGCGT CGACGCGACG AAGCTGCCGT TCGTGCGCAT CGGCGATTCG
GCGCGGGTGC GCGCCGGCGA ACCGGTGATG ACGATCGGCG CGCCCGACGG CTCGGGCAAT
ACGGTCACGG CCGGCATCGT CAGCGCGACG GCGCATCCGC TGCCGGACGG CAGCGCGTTT
CCGTTCTTCC AGACCGACAT CGCGGTGAAT CCCGACAACT CGGGCGGCCC GGTGTTCAAC
CGCGCGGGCG AGGTGATCGG CATCGCGGTG CAGGTCTATA CCGGCGCCGA CCGCTACGCG
AGCACGACGT TCGCGATCCC GATCGCGTTC GCCATGAAGG TGCGTGCGCA AGCGCAGGCG
CAGATGCGGA CCAACGCGCA GGCGCAGCGC ATGTCGTCCG TGTCGTCCGG CAACGCGCTG
GGCGTCGACG TACAGGATGT CGGCGCCGGG TTGGCCGCCG CGTTCGGTCT GCCGCGTCCG
GTGGGCGCGC TCGTCAACGG CGTCGATCCC GGCTCGCCGG CCGCCGCGGC CGGCGTGAAG
CCCGGCGACG TGATCGTGCA GTTCGGCGAC AAGCCGATCG GCCAGGCTGC CGAGCTGAAC
GACCTGGCCG CCGCGTTGCC GCCTGGCGGG AAGGTGCCGC TGCGGCTGAT CCGCAACCGC
ACGCCGATGC GGCTGACGGT CACGGGAGCG GCGACTGGTG ACGCGATCGA CACCGCGGCT
TACAACGCGC CCTACAACGC GCCCGCGACG GGCAGCGCAG GCACGGTAGG CACTGCCGGG
GCGGCGGGCG TGGCGATGGC CGCCGCACGG CCGGCCGATG GCGGCGATCG GCTCGGGCTG
ACGATGCATC CGCTGAGCGA TGCCGAACGG CGGTCGACCG GGCTCGCGGT CGGGATGATG
GTGGATGCGG TGCACGGGCC GGCCGCGCGC GCGGGCATCC GGCCGGGCGA CGTCGTGCTG
GAACTCAACG ACACGCTGCT CGAAACGCCG GAAGACGTGC CGGCGCTCGA AGCGAGCGGC
GGCGTGATCG CGGTGCTGAT CCAGCGCGAG AACGCGCGCA AGTTCGTGTC CGTGCGGGCG
CGGTAG
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| Protein sequence | MVRQTLARAV LRTALIGGVF AGILSSSPPT RAGTVATPAP PPVMKSRPAT RAYSMPVDFP
AIVDRYGPAV VTIMTTGPDQ QPGGPAFAIL EPDDPLTGFF RRGAQPPAPP PPLMPGQGPQ
APLPDTSPRA IAGSGSGFIV SPDGLILTSA HIVADATDVT VRLADRRDLK ATVLAVDPQS
DVAVLRVDAT KLPFVRIGDS ARVRAGEPVM TIGAPDGSGN TVTAGIVSAT AHPLPDGSAF
PFFQTDIAVN PDNSGGPVFN RAGEVIGIAV QVYTGADRYA STTFAIPIAF AMKVRAQAQA
QMRTNAQAQR MSSVSSGNAL GVDVQDVGAG LAAAFGLPRP VGALVNGVDP GSPAAAAGVK
PGDVIVQFGD KPIGQAAELN DLAAALPPGG KVPLRLIRNR TPMRLTVTGA ATGDAIDTAA
YNAPYNAPAT GSAGTVGTAG AAGVAMAAAR PADGGDRLGL TMHPLSDAER RSTGLAVGMM
VDAVHGPAAR AGIRPGDVVL ELNDTLLETP EDVPALEASG GVIAVLIQRE NARKFVSVRA
R
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