Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3932 |
Symbol | |
ID | 4312828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 821667 |
End bp | 824261 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638151774 |
Product | hypothetical protein |
Protein accession | YP_775820 |
Protein GI | 115358682 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.57988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCC GCCACTCTGG TCCGCCCGGC CGCGCCGCGG CGGCGCTCGC CCGTGTGTCG ACGCTGATCC GCAACGAGCG CGTGCTGTCG CCGCTGCTCG CGCTCGGCAT CGGCCTGCTG CTGATCGTGG TTTTCCAGCA CCTGTCCGAA TCCGTCGACT ACCGGTCGGT GATCCGCCAG CTGCGCCACA TGTCCGTCGG CGAATGGGGC GCATCGCTCG CCGCGACGGC CCTCAGCTAT CTCGCGCTCG TCGCCCGCGA TGCGGTGGGC CTACGCTACG TCGCCGCGAA GGTGCCGCGC GCCGCGCTGT GGATCGGCTC GATCGCCGGC TCCGCGCTCG GCAACGCGAC CGGCTTCGGC GCGCTCACGG GCGGCGCCGT GCGCGCGCGC GTGTACGGCG TGTCGGGCGT CACGCCCGCG CAGATCGGCC GGATGACGGT ATTCACCAGC GGCACGCTCG CACTCGCGCT GGTGCTGATG ACGGCGGTCG GCATGGTCTG CGTGCCGCAG ACGCTCGCCG CGATGCTGCA TGTCGCACCG GGTGTGCTCA CGTGGAGCGG CGCCGCGCTG CTCGTGGTGC TGGCCGTTGT GGTCGCGCTG TGCGGCAACA CCGCGCGTCC GGTCGTCACG CGCTTCAAAT GGCTCGCGTT CGACGTGCCG GCACGGCGCG ACCTCGTCGC GCAGGTCGTC TACGCGGTGC TCGACGTCGT GGCCGCCGGC CTGACGCTGT GGGTGTTGCT GCCGGTCGCG CCGGTCGGCT TCCCGACCTT CATCACGGTC TACGCGGCCG CGCTGCTGCT CGGGATGATC GGTCATACGC CGGGCGGGAT CGGCGTGTTC GAAGCCGCGA TGGTGTTCAC GCTGGGCCGC GAAGTGCCCG CGCACGCAAT GGTCGCCGCG CTGATCGCCT ATCGCGCGAT CTACTTCGGC GTGCCGCTCG TGCTGTCGGC CGGCCTGCTG GCCGGCTTCG AGGGCCGCGC GCTGCGGCGC CGGCTCGTGT CGCGGCAGGC CGCGCGCGTG TCGCAACTGG CGCCGCTGTT CCTGAGCCTC GTGACCTTCG CGGTCGGCGG GATGCTGGTG ATCTCGAGCG CGACGCCCGC GTTCTGGCAT CGGATCGCGA TCCTGCGCAA CATCGTGCCG CTGTGGGTGC TCGAAGGCTC GCAGGTGATC TGCAGCGTGC TGGGTGTCGC GCTGCTGTTC GTCGCGCGCG GGCTGCTGCG CCGGCTGGAC GGCGCGTGGT GGATGACCTT CGCGCTGACG CTCGCGAGCC TCGCGCTGTC GCTGGCGAAG GGCCTCGCGT TCGTCGAGGC CGGCGTGCTC GGCACGCTGC TGGTGCTGCT GCTCGTCAGC CGCCGCCGCT TCAGCCGGCA TTCGTCGCTG CTCGCCGAGC GCTTCACGGT GAGCTGGTTC GTGTCGGTGA CGATGGTGCT GATCCTCGCG GTGTGGGTGC TGTGCTTCGC GTTCCGCGAT GTGCCGTACA CGCGCGATCT GTGGTCGCAT TTCTCGTTCG ACGCACGGGC GCCGCGCGCG CTGCGCGCCA CGCTCGCGTC CGGCGTGTTC GTCGCGCTGT TCGCGCTGTG GCAGCTGCTG CGCCCCGCGC CGGGCCGTTT CGTGAAGCCG GTCGCGCAGG ATCTGCTCGA CGCCGAGCAG ATCATCCGCG CGCAGGAGTG CAGCGATGCG GGCCTCGCGC TGATGGGCGA CAAGTCGTTC CTGTTCTCCG AATCGCGCCG CGCGTTCCTG ATGTACGCGA AAAACGGCCG CACGTGGGCC GCGCTGCACG ATCCGGTCGG CCCGCGCGAG GAATGGCCGG CGCTGATCAG CAAGTTCATT GCGCTGGCGC ATGCGCACAG CGGCCGCGCG GCGTTCTACC AGGTGCGCGC GAACGCGCTG CCGCTGTACC TCGACGCGGG GCTCACGCTG ATGAAGCTCG GCGAGGAAGC GCACATCGCG CTCGACCGGT TCGACCTGAA GGGCTCGAAC CGTTCGCACC TGCGCTACGC GCTGCGCCGC GGCGACAAGG ACGCGCTGAG TGTCGAGGTG ATCGCGCCGT GCGACGTGCC GGCCGCGCTG CCGGCGCTGC GCGACATCTC GGACGGCTGG CTCGACAGCC GCGATGCGCG CGAGAAGAGC TTCTCGGTGG CCGCGTTCCA CGACGGCTAT CTCGCGACGC AGTCGGTGAT GCTGGTGCGC CAGGCCGACA AGCCGATCGC GTTCGTCACG TTCATGACGA CCGACCTCAA CACCGAGGCG ACGGTCGGCG TGATGCGTCA CCTGCCGGAA GCGTCGCCGT ATGCGATGGA GTATCTGTTT ACGCAGCTCG CGCTGCATCT GAAGGAAGCG GGGTTCCTCA AGCTGAGCCT GGGTATCGCG CCGTTCTCGG GGATGGGGGC GGCGAAGATG CCGTCGCCGT GGCACCGGTT CGGGCTGATG GTCTGGCGCT TCGGCGGCCG CTTCTACAAC TTCCGTGGCT TGCGTGCATT CAAGAGCAAG TTCGAGCCGC ACTGGGAGCC GCGCTATCTC GCGGCCTCGG GCTCGGTCGG CGTGTTCGTC ACGCTCGCGG ACCTGTCCCT GCTGGCTGGA GGTCGGCGCT CATGA
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Protein sequence | MSSRHSGPPG RAAAALARVS TLIRNERVLS PLLALGIGLL LIVVFQHLSE SVDYRSVIRQ LRHMSVGEWG ASLAATALSY LALVARDAVG LRYVAAKVPR AALWIGSIAG SALGNATGFG ALTGGAVRAR VYGVSGVTPA QIGRMTVFTS GTLALALVLM TAVGMVCVPQ TLAAMLHVAP GVLTWSGAAL LVVLAVVVAL CGNTARPVVT RFKWLAFDVP ARRDLVAQVV YAVLDVVAAG LTLWVLLPVA PVGFPTFITV YAAALLLGMI GHTPGGIGVF EAAMVFTLGR EVPAHAMVAA LIAYRAIYFG VPLVLSAGLL AGFEGRALRR RLVSRQAARV SQLAPLFLSL VTFAVGGMLV ISSATPAFWH RIAILRNIVP LWVLEGSQVI CSVLGVALLF VARGLLRRLD GAWWMTFALT LASLALSLAK GLAFVEAGVL GTLLVLLLVS RRRFSRHSSL LAERFTVSWF VSVTMVLILA VWVLCFAFRD VPYTRDLWSH FSFDARAPRA LRATLASGVF VALFALWQLL RPAPGRFVKP VAQDLLDAEQ IIRAQECSDA GLALMGDKSF LFSESRRAFL MYAKNGRTWA ALHDPVGPRE EWPALISKFI ALAHAHSGRA AFYQVRANAL PLYLDAGLTL MKLGEEAHIA LDRFDLKGSN RSHLRYALRR GDKDALSVEV IAPCDVPAAL PALRDISDGW LDSRDAREKS FSVAAFHDGY LATQSVMLVR QADKPIAFVT FMTTDLNTEA TVGVMRHLPE ASPYAMEYLF TQLALHLKEA GFLKLSLGIA PFSGMGAAKM PSPWHRFGLM VWRFGGRFYN FRGLRAFKSK FEPHWEPRYL AASGSVGVFV TLADLSLLAG GRRS
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