Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3926 |
Symbol | |
ID | 4312822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 814320 |
End bp | 815444 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638151768 |
Product | extracellular solute-binding protein |
Protein accession | YP_775814 |
Protein GI | 115358676 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.808306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACGG GGAATTCGGA CGGGGACCGA TTGGTCAGGG GAATCGGCGC GCCTCGGCGT GCGCGCCGTG CCGTGTGCCG GTTGCTTGTC GTCTTCTCAC TGGGCCTGCC GGCCCTGCCT GCGTGTGCCG CTTCTCCCGA AGTCGTCGGC GACAACGTGC TGCGTGTGCT CGCGTGGCCC GGCTATGCGG ACAGCGATGT CGTCAATGCA TTTGAGACGC ACTTTCATGT ACGCGTCGAA GTGACGTTCG TCGATTCCGA CGAAGCGTTG TGGACGCGGA TGCACAGCGC ATCGCCACCG CCGTACGACG TGCTCGCGGC CAACACGGCC GAGATCCAGC GCTACGCGCA CGACGACCTG CTGACGCCGA TCGACCTGTC GCAGATCCCG AACCGCCGGC GGCAACTGCC GAATTTCCAG CAGCTCGCGA CGATCGGCGG CCTCGTGCGC AACGGCTCGA CCTACGCGAT TCCGTTCACG TATTCGTCGA TGGGGCTGAT CTACGATCGC AAGCAGGTGC CGGCCCCGCC GCGCTCGATG CTCGCGCTCT GGAACCCGCG CTACCGCGGC AAGGTGCTCG ACTTCAACAG CGCGCAGCAT AATTTTTCGT TCACCGCGCT CGCGCTCGGC TATGCCGATC CGTTTCACCT GTCACCCTCG CAAACGCTCG CCGTCGCGCA CAAGCTGATC GATCTGCGAC GCAACCTGCT CACGTATTAC ACGCTTCCCG AAGAAGCGAC CGCGCTGTTC ATCCGGCATC GCGCGGCGCT GATGTTCGGC AACTACGGCA CGCAGCAGGT CGAGCAACTG CGTCGCGCCG GTGCGGATGT GGGCTACGTG ATTCCGGACG AAGGCGCGCT CGCGTGGCTC GACTGCTGGG GCGTCACGCG TGGCGCGGAG CATCGCGAGC TCGCGTTCGC GTGGATCAAT TACATGCTCG AGCCCGCGAT CGGCGCGCTG CTGACCGAGC GCCAGGGGCT TGCGAATACG CTCGCGCCGC CATCCGGTCT CCAGACCGGC CATCAGCACC TCGTGTGGCT CCAGCCGGTC GAGGACATCG CGCGGCGCGA GTCGCTGTGG AGCCGCATCG TGTCGGGCGA CCGGCCGGAG TGGTTCGAAA AATGA
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Protein sequence | MHTGNSDGDR LVRGIGAPRR ARRAVCRLLV VFSLGLPALP ACAASPEVVG DNVLRVLAWP GYADSDVVNA FETHFHVRVE VTFVDSDEAL WTRMHSASPP PYDVLAANTA EIQRYAHDDL LTPIDLSQIP NRRRQLPNFQ QLATIGGLVR NGSTYAIPFT YSSMGLIYDR KQVPAPPRSM LALWNPRYRG KVLDFNSAQH NFSFTALALG YADPFHLSPS QTLAVAHKLI DLRRNLLTYY TLPEEATALF IRHRAALMFG NYGTQQVEQL RRAGADVGYV IPDEGALAWL DCWGVTRGAE HRELAFAWIN YMLEPAIGAL LTERQGLANT LAPPSGLQTG HQHLVWLQPV EDIARRESLW SRIVSGDRPE WFEK
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