| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3908 |
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| Symbol | |
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| ID | 4312804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 798145 |
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| End bp | 799533 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151750 |
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| Product | major facilitator transporter |
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| Protein accession | YP_775796 |
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| Protein GI | 115358658 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCG AACCTTCACA TTCCGCGCTG CTGTGGATCG TCGCCGCCGC GTTCTTCATG
CAGTCCCTCG ACACGACGAT CGTCAACACC GCGCTGCCGT CGATCGCGCA GAGCCTGCAT
GCGTCGCCGC TCGCGATGCA GCCGGTCGTG GTCGTCTACA CGCTGACGAT GGCGATGCTC
ACGCCGGCGT CCGGCTGGCT CGCCGACCGG TTCGGCACGC GCCGCGTGTT CTCGCTCGCG
ATCCTGGTGT TCTCGCTTGC ATCGATCGGC TGTGCCGCGT CGCACACGCT CGGCCAGCTC
GTCGTCGCGC GTGCCGTGCA GGGCATCGGC GGCTCGATGC TGCTGCCGAT CGGGCGGCTT
GCGGTGTTGC GCCGCGTGCC GGGCGAACAG TACGTCGCGG CGATCGCGTT CGTGTCGATC
GCCGGGCAGC TCGGCCCGAT CGTCGGGCCA ACGCTCGGCG GCTGGCTCAC GCAGGCGATT
TCCTGGCACT GGGTGTTCAT CGTCAACGTG CCGGTCGGCG TGGTCGGCTT CATCGCGGTG
CAACGCTTTC TGCCGCACGA CCACGCGACC CGGCCGCCGC CGTTCGACTT CGTCGGGTGT
GCATTGCTGT CGGTCGCGAT GCTCGCGCTG TCGCTCGCGA TCGATCCGCC GATGCCCGCG
CACCGCGCCG GCTGGGCGAT CGGGCTCGCC GTGCTCGGCG TGGCGAGTGC CCTTGCGTAC
CTGCCCCACG CGCGGCGCCG CGCGCAGCCG CTGTTCCGGC TCGGGTTGTT CCGCGAGCCG
AACTTCGGCT CGGGGCTACT CGGCAACCTG CTGTGCCGGA TCGGCACGAG CGCGGTGCCG
TTCATGCTGC CGCTGCTGAT GCAGGTGCAG CTCGGCTATA CGCCGCTGCA GTCGGGGATG
ATGATGCTGC CGGCCGCGAT CGCCGGCGTG ATCGCGAAGC GCTGGATCGC GCCGCTCGCG
AAACGCTTCG GCTATGCGAC GTTTCTGGTC GTGAACACGG GGATCGTCGG CTGCGCGATC
GCGGGGTTCG CGCTGGTGTC GGCGCGGCCC GCGCCGGCGC TGGAGATGGC GTTGCTGATC
GTGTTCGGCG CCGCGAACTC GATGCAGTTC GCCGCGATGA ACGCCGTGAC GCTCAAGGGG
CTGTCGCACG CCGACGCCGG CAGCGGCAAC AGCCTGTTCA CGATGATGCA GATGCTGGCG
ATGGGGCTCG GCGTGTCGAT CGGCGGCGGG CTCGTGAACC TGTTCGCCGC GCGTTGGGGC
TCGATGGCGA ACGGCTTCAT GTTGTCGTTC GTCTGCATGG GCTCGGTCAC GCTGCTGTCG
TCGGTCGTGT TCCGGCGGAT CGATACTGCG GGGCCGCCGA GGCCGGTTGT GCCGCGGGCG
TCTGCGTAA
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| Protein sequence | MSREPSHSAL LWIVAAAFFM QSLDTTIVNT ALPSIAQSLH ASPLAMQPVV VVYTLTMAML
TPASGWLADR FGTRRVFSLA ILVFSLASIG CAASHTLGQL VVARAVQGIG GSMLLPIGRL
AVLRRVPGEQ YVAAIAFVSI AGQLGPIVGP TLGGWLTQAI SWHWVFIVNV PVGVVGFIAV
QRFLPHDHAT RPPPFDFVGC ALLSVAMLAL SLAIDPPMPA HRAGWAIGLA VLGVASALAY
LPHARRRAQP LFRLGLFREP NFGSGLLGNL LCRIGTSAVP FMLPLLMQVQ LGYTPLQSGM
MMLPAAIAGV IAKRWIAPLA KRFGYATFLV VNTGIVGCAI AGFALVSARP APALEMALLI
VFGAANSMQF AAMNAVTLKG LSHADAGSGN SLFTMMQMLA MGLGVSIGGG LVNLFAARWG
SMANGFMLSF VCMGSVTLLS SVVFRRIDTA GPPRPVVPRA SA
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