Gene Bamb_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3892 
Symbol 
ID4312788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp786132 
End bp786479 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content64% 
IMG OID638151734 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_775780 
Protein GI115358642 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC GATGCATCGT CATCTCCGTT TTTGGCGCGA TGGCCGTCGT GGCCACGCCG 
GTGCGCGCGG CCGGCAGCAT GTCCGGCATG AGCATGGGCG ACATGAAGAT GGCCGCGCCG
GATGCGGCGC TGACCGACGC CGAAGTGAAA CGGATCGATG CGGCGCACGG CATGGTGACG
TTGAAGCACG GCGCGCTGGA GAACGTCGGG ATGGCGCCGA TGACGATGGC ATTCAAGGCC
GGCGACCCGG CGATGATCGA TTCGCTGCAC GTGGGCGACA AGGTCAAGGT AAGGGTCGAA
CGCGTGAACG GCACGCTTAC GATCGTGACG CTCGTGAAAC GGCCCTGA
 
Protein sequence
MKIRCIVISV FGAMAVVATP VRAAGSMSGM SMGDMKMAAP DAALTDAEVK RIDAAHGMVT 
LKHGALENVG MAPMTMAFKA GDPAMIDSLH VGDKVKVRVE RVNGTLTIVT LVKRP