Gene Bamb_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3891 
Symbol 
ID4312787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp783795 
End bp786107 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content69% 
IMG OID638151733 
Productmolybdopterin oxidoreductase 
Protein accessionYP_775779 
Protein GI115358641 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAC GATCCATCCA AACCGCTTCG CACTGGGGCG TCTACAACGT GCTTACGGAC 
GCCGACGGCG CCATCACGGG CATGACGCCG TTTGCCGCCG ACCGCCATCC CGCGACCTTC
GTCGGCGGCC TGCCGGAGAT CGTGCGCGGA CGGCTGCGCA TCGACCGGCC CTACGTGCGC
GCCGGTTACC TGCGCTCGCG CAACCGCGAC CGTCGCGGCG GCGACACCTT CGTGCCGGTG
AGCTGGGACG ATGCGCTGCG CCTCGTCGCC GACGAGCTTG CGCGGGTCAA GGCCGAGCAC
GGCAACGAAG CGATCTACGG CGGCTCGTAC GGCTGGGCCA GCGCCGGGCG CCTGCATCAC
GGGCCGAGCG TGCTCAAGCG GCTGCTCGGC CTGCACGGCG GCTACGTCGA CAAGCGCGGC
AACCACAGCT TCGGCGCGGC CCTCGGCGTG ATGCCGTACA TCCTCGGGCG CTCGGATATC
ACGAACCTCG TGCCGTCCTG GCCGGACGTG ATCGAATCGA CCGGACTGGT GGTCATGTTC
GGCGGGGCCG CGATGAAGAA CACGCAGCTC GACGCCGGCG GCGCCGTGAT TCACGACAGC
GTCGACTGGT ACGCCCGGGC CGGCGAGCAG GGCCCGCCGT TCATCGTGAT CAGCCCGTCG
CGCGCCGACG TGCCCGCCGG CCCCCGCGCG GAATGGATTC CGATCCGGCC GCATACCGAT
ACCGCGCTGA TGCTGGGCAT CGCGCACACG CTCGTCGACG AAGGGCTGCA CGATACCGGC
TTCCTGTCGC GCTACTGCGA GGGATTCGAG CGGTTCGAAG CGTATCTGCT CGGCCGCGAC
GGCGGCACGC CGCGCAGCCC CGAATGGGCG GCGGAGATCA CCGGCATTCC GCCCACGCGC
ATCCGCGAAC TCGCGCGATC GATGGCGGCC AACCGGACCC TGATCAACCT CAGTTGGTCG
ATCCAGCGAG CCGATCACGG CGAGCAACCG GTATGGATGG TGGTGACGCT GGCCGCGATG
CTGGGTCAGA TCGGCCTGCC CGGCGGCGGC TTCAGCCTCG GCTTCGGCGC CGTCAACGGC
ATCCTGACGC CGCGCGTCGA CGGGATGCCC AGGCCGACGC TGCCGCTCGG GAAGAATCCC
GTGCGCACCT ACGTGCCGGT CGGGCGCGTG GCCGACATGC TGCTGCATCC CGGCCAGCAG
ATCCGGTGTT TCGGCGAGAC GATCACGTTT CCGGATATCC GGCTCGTCTA TTCGATCGGC
GGCAATCCGT TCCACCACAA CGCGAACCTG AATCGCTTCC TGCGCGCGTG GCAGCAGCCC
GAAACCGTGA TCGTCCACGA ACCCTGGTGG AATCCGGCAG CGCGGCACGC GGACATCGTA
TTGCCGGCGA CGACCACGAT GGAACGCAAC GACATTCTCG CGCACGAGCA TTCGCCGTAC
TGGCTCGCCA TGCGGCAGGT GATCGAACCG GTTGGCCTCG CGCGGAACGA CTTCGACATC
CTGGCCGACG TGGCCGATGC GCTCGGCTTC CGGGCGGCGT ATGACGAAGG ACGCGACGAA
TCGGGCTGGC TGCGTCACAT GTACGACGTC GCCAGAAACA CCGCGCAGAA GAACGGCTTC
ACCCTTCCCG ACTTTGCGAC GTTCTGGGCC GACGGCCAAT ACCGGTTTCC GCAACCGGAC
GCGCGCACCG TGCTGCTGGA CGCGTTTCGC CGCGATCCGG TCGCCCACGC GCTGGCGACC
GCGTCCGGGA AAATCGAAAT TCATTCGCGC GTGATCGAGC AGTTCGGCTA CGACGATTGC
CCGGCGCATC CGGCGTGGCT CGAACCGCAG GAATGGCTGG GCGCGGCCGA CGCGGCGCGC
CATCCGCTGC ATCTGCTGTC AAACCAGCCG GCGACCCGGC TGCACAGTCA GCTCGACCCC
GCTTCGGCCA GCCGGGCGAG CAAGGTCGCC GGGCGCGAGC CGCTCTACAT GCATCCGCAC
GATGCGGCGT CCCGCGGCAT TCGCGACGGG CACGTCGTGC GTGTGTTCAA CGATCGTGGC
GCGTTCCTCG CGGGTATCGT GCTCGCCGAC TTCCTGGTGC CGGGCGTCGT GCAGATCGCG
ACCGGCGCGT GGTACGACCC GCTGCACGGC GGCATGCCGG GCACGCTCGA AAAACACGGC
AATCCCAATG TCGTCACGCT GGACAAGGGA ACGTCGGAGT TGACGCAGGG ATCCGTCGCG
CAAACGGCGC TGGTGGAAGT CGAGGTCTTT GCCGACCCGC CGCCCGTCAC GGCATTCGAG
CCGCCCGCGA TCGCCGAAAC CGGCGCCGGC TGA
 
Protein sequence
MATRSIQTAS HWGVYNVLTD ADGAITGMTP FAADRHPATF VGGLPEIVRG RLRIDRPYVR 
AGYLRSRNRD RRGGDTFVPV SWDDALRLVA DELARVKAEH GNEAIYGGSY GWASAGRLHH
GPSVLKRLLG LHGGYVDKRG NHSFGAALGV MPYILGRSDI TNLVPSWPDV IESTGLVVMF
GGAAMKNTQL DAGGAVIHDS VDWYARAGEQ GPPFIVISPS RADVPAGPRA EWIPIRPHTD
TALMLGIAHT LVDEGLHDTG FLSRYCEGFE RFEAYLLGRD GGTPRSPEWA AEITGIPPTR
IRELARSMAA NRTLINLSWS IQRADHGEQP VWMVVTLAAM LGQIGLPGGG FSLGFGAVNG
ILTPRVDGMP RPTLPLGKNP VRTYVPVGRV ADMLLHPGQQ IRCFGETITF PDIRLVYSIG
GNPFHHNANL NRFLRAWQQP ETVIVHEPWW NPAARHADIV LPATTTMERN DILAHEHSPY
WLAMRQVIEP VGLARNDFDI LADVADALGF RAAYDEGRDE SGWLRHMYDV ARNTAQKNGF
TLPDFATFWA DGQYRFPQPD ARTVLLDAFR RDPVAHALAT ASGKIEIHSR VIEQFGYDDC
PAHPAWLEPQ EWLGAADAAR HPLHLLSNQP ATRLHSQLDP ASASRASKVA GREPLYMHPH
DAASRGIRDG HVVRVFNDRG AFLAGIVLAD FLVPGVVQIA TGAWYDPLHG GMPGTLEKHG
NPNVVTLDKG TSELTQGSVA QTALVEVEVF ADPPPVTAFE PPAIAETGAG