| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3887 |
|---|
| Symbol | |
|---|
| ID | 4312783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 780941 |
|---|
| End bp | 781579 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638151729 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_775775 |
|---|
| Protein GI | 115358637 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTCA TCAAGTCCGT CGTGATGGGA TTGTCGATCG CGGTGCCGGT CGGCCCGATC
GGGATGCTGT GTATCCAGCG CAGCCTGAGC CGAGGCTTTC AGGCGGGGTT CGCCACGGGC
ATCGGCGCCG CGTGCGCCGA TGCGATCTAC GGGCTGCTCG GCGCGCTGGG CGTCGCCGGC
ATCGTCACCG CGTTTCCGAT GCTGACCGTC GCGCTGAAAA TCGGCGGCGG CGCGTTCCTC
GTGTGGCTGG CCTGGACCAT CGCGCGGCAG GCACCGGCCG CATCGGCGGC ACAGCGCGAC
TTGTCGCGCA CGACGGTGCT GCGCGATTTC CTGACGACGT TCGGCCTGAC GCTGTCGAAT
CCGATGACGA TCCTGTCGTT CGTCGGGATT TTCGCGGCGC TCGGCCCGCT GACCGGCACG
CATGACGACG CGATGGGGCC GACGGTCGCG CTGATGGTCG CCGGCGTGTT CGTCGGTTCC
GCGACGTGGT GGCTGTGCCT GAGCAGCGCG ACCGCCGCGT TGCGCACGAA GATGCCGCTG
ACGTTCATGC ACGGGCTGTC GCGCGTGTCG GCCGTCGTGA TCGCGGTGTT CGGCGCGATC
CAGTTGATTG CGGGCGTACA TGGCATCGTG TGGTCCTGA
|
|---|
| Protein sequence | MLFIKSVVMG LSIAVPVGPI GMLCIQRSLS RGFQAGFATG IGAACADAIY GLLGALGVAG
IVTAFPMLTV ALKIGGGAFL VWLAWTIARQ APAASAAQRD LSRTTVLRDF LTTFGLTLSN
PMTILSFVGI FAALGPLTGT HDDAMGPTVA LMVAGVFVGS ATWWLCLSSA TAALRTKMPL
TFMHGLSRVS AVVIAVFGAI QLIAGVHGIV WS
|
|---|
| |