Gene Bamb_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3881 
Symbol 
ID4312777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp775930 
End bp776568 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID638151723 
ProductYheO domain-containing protein 
Protein accessionYP_775769 
Protein GI115358631 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0788485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CCCGCCCCCG ACCGCAACTG GAGCAGGCAT CGCTGATCGA GCAGGTGCTG 
CGCATCGCCG AAGGGCTCGG CGCGATGTTC GCGCCGTTCA CCGAGGTCGT CGTGCACGAC
CTGCGCACGC CGGAACACGC GATCCTCGCG ATCCACAACA ACCTGTCGGG CCGCGCGGTC
GGCGATCCGG CGACCGAACT CGGGCTCGCG CGCATCGAGG ACGACGACTA CCCGCAGGTG
CTCGCGAACT ACGCGAACCG CTTCGCCGAC GGCCGCACCG CGAAAAGCAC GTCGATCGGC
ATCAAGGATT CGAGCGGCCG CTACGTGGCC GCGCTGTGCC TGAACGCGGA CGTCACGCTG
TTCCGCGGCT TCCAGGGCAT GCTGAACCAG TTCTGCAGCA CCGAAGGCGA ACCTGTCGCA
GAAACGCTCG ACCCGGCCGG CGCGGACGCG ATCCGGCAGC GCATCGATGC GTTCGCGACG
CGCCTGGCGA CTACCCCACG CGAGCTGAAG ACCGACCAGC GCCGCGAGCT GATGCACGCG
CTGAAGGCCG ACGGCTTCCT CGAGGTGCGC CGCGCGATGG AAATCGTGTC GCAGCACCTC
GGCGTGTCGC GCGCCACCGT CTACAACGAT GCGAAATGA
 
Protein sequence
MTTPRPRPQL EQASLIEQVL RIAEGLGAMF APFTEVVVHD LRTPEHAILA IHNNLSGRAV 
GDPATELGLA RIEDDDYPQV LANYANRFAD GRTAKSTSIG IKDSSGRYVA ALCLNADVTL
FRGFQGMLNQ FCSTEGEPVA ETLDPAGADA IRQRIDAFAT RLATTPRELK TDQRRELMHA
LKADGFLEVR RAMEIVSQHL GVSRATVYND AK