| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3878 |
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| Symbol | |
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| ID | 4312774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 772914 |
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| End bp | 773168 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151720 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_775766 |
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| Protein GI | 115358628 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.286647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0733287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGAGC GCGCGCACCA TCCGGGCGGC GTGAACACGG CGATGTCGAA CCCGAGCGGC
GCACCGCTCG ACGAGATCAA CAACCACTAC ACGCACGTGC CGCTGCAACG CGTCGGCTTG
CCTGACGAAA TCGCGCGCGC GACGCTGTTC CTCGCGCGCG ACGAAGCGTC GTACTGCAAC
GGCACCGAAC TGGCCGTCGA CGGTGGGATG GCGGCATGCG CGTATTACCC CGGATTGCCG
GGCGCGCCGC TTTGA
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| Protein sequence | MRERAHHPGG VNTAMSNPSG APLDEINNHY THVPLQRVGL PDEIARATLF LARDEASYCN
GTELAVDGGM AACAYYPGLP GAPL
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