| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3874 |
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| Symbol | |
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| ID | 4312770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 766000 |
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| End bp | 767967 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151716 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_775762 |
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| Protein GI | 115358624 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.173142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA AATTCGACTA CGCAGGATTA CTGATCGCGG CGGGCTTCTT CGTGCTGTTC
GCTGCGCAGT TGCTGATGCT GCGGCCCGAG ACGACGATGA TCGCGTACAG CGATTTCCAT
CGGCTCGTCG ACGCGCGCCT CGTCGACGAT CTCGAGATCG GCTCGACGTC GATCGTGGGC
ACGCTGAAGA TGCCGCAGGC CGGCGCGATG CTGCCGGCAT CCGAAGTCGC GGCCGTGAAG
GCGGGCGGCA CGCCGCCGCG CTTCGCCACC AACCGCGTGA CCGACCCGCA ACTGATCGAC
GCGCTGAGCG CGGCCGGCGT CCGCTTTCAC GGCGCGTCCG ACACCGGCTG GATCACGTCG
CTCGCGTCGT GGCTGGTGCC GCTCGTGGCG TTCGTGTTCA TCTGGAACCT GATGCTGCGC
AGGCGCGGCG GGTTGCAGGA CTTCACCGGG ATGGGCAAGA GCCGCGCACG CGTGTACGTG
CAGCAGGAAA CCGGCATCAC GTTCGACGAC ATCGCGGGCA TCGACGAAGC GAAGGCCGAG
TTGCAGCAGC TCGTCGCGTT CCTGCGCAAC CCCGACCGCT ACCAGCGGCT CGGCGGCAAG
ATCCCGAAGG GCGTGCTCGT CGTCGGCGCG CCCGGCACCG GCAAGACGCT GCTCGCACGC
GCGGTGGCCG GCGAGGCGGC CGTGCCGTTC TTCTCGATCA GCGGCTCGGC GTTCGTCGAG
ATGTTCGTCG GCGTGGGCGC CGCGCGCGTG CGCGACCTGT TCGAGCAGGC GCAGCAGAAG
GCGCCGTGCA TCGTGTTCGT CGACGAGCTC GATGCGCTCG GCAAGGTGCG CGGCGTCGGG
CCGATGTCGG GCAACGACGA GCGCGAGCAG ACGCTCAACC AGCTGCTCGT CGAGATGGAC
GGCTTCCAGG CCGGCACGGG CGTGATCATC ATGGCCGCGA CCAACCGGCC GGAGATTCTC
GATCCGGCGC TGCTGCGCCC CGGCCGCTTC GACCGTCACA TCGCGATCGA CCGGCCCGAC
GTGAACGGGC GCCGCCAGAT TCTCGGCGTG CATGTGAAGC GCGTGAAGCT CGCGGACGAA
GTCGACCTCG GCGAACTCGC GTCGCGCACG CCGGGTTTCG TCGGCGCCGA TCTCGCGAAC
GTCGTCAACG AGGCGGCGCT GCATGCGGCC GACCTCGGCA AGCCGGCGAT CGGGATGGAC
GATTTCGACG AAGCGATCGA TCGCGCGATG ACGGGCCTCG AGCGCAAGAG CCGCGTGATG
AACGCGCAGG AAAAGCTGAC GATCGCGTAT CACGAGGCCG GCCATGCGCT CGTCGCGGAA
AGCCGCGCGT ATTGCGATCC GGTGAAGAAG GTGTCCATCA TTCCGCGCGG CGTGGCCGCG
CTCGGCTATA CGCAGCAGGT GCCGACCGAG GATCGCTACG TTCTGCGACG CAGCGAGCTG
CTCGATCGGA TCGATGCGCT GCTCGGCGGC CGCGTCGCGG AAGAACTCGT GTTCGGCGAC
GTGTCGACGG GCGCGCAGAA CGATCTCGAA CGCGCGACCG CGATGGCGCG CCACATGGTC
ATGCAGTACG GGATGAGCGA GAAGATCGGG TTGATGAGTT TCGACGACGG CGAGGCGCGC
AGCGGCATAC CGGGCGCGTG GCATGCGGGC GAGGGCCGCT GCAGCGAGCA CACCGCGCGC
GTGATCGACG ACGAGGTGCA TACGCTGCTG ACGGATGCGC ATGCGCGCGT CGCGGCGACG
CTCGGCGCAC GTCGCGACGC GCTCGAGCGG ATCGCGCGAC GGCTGCTCGC GTGCGAGGTG
CTGGAACGCG ACGCGTTGCA GGCGCTGATC GACGGGCGCG AGGTGCCTGC GTCCGAGCCT
TCGATGATCG ATTGCGGGCC GTGCACGGGT GTGAATGCGC CGGGGCAGGC GTCGGCGGCC
GAGCACGATT TCGTCGCATG CGGGCCGCCG CGCGAACCGG AGCGCTGA
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| Protein sequence | MDKKFDYAGL LIAAGFFVLF AAQLLMLRPE TTMIAYSDFH RLVDARLVDD LEIGSTSIVG
TLKMPQAGAM LPASEVAAVK AGGTPPRFAT NRVTDPQLID ALSAAGVRFH GASDTGWITS
LASWLVPLVA FVFIWNLMLR RRGGLQDFTG MGKSRARVYV QQETGITFDD IAGIDEAKAE
LQQLVAFLRN PDRYQRLGGK IPKGVLVVGA PGTGKTLLAR AVAGEAAVPF FSISGSAFVE
MFVGVGAARV RDLFEQAQQK APCIVFVDEL DALGKVRGVG PMSGNDEREQ TLNQLLVEMD
GFQAGTGVII MAATNRPEIL DPALLRPGRF DRHIAIDRPD VNGRRQILGV HVKRVKLADE
VDLGELASRT PGFVGADLAN VVNEAALHAA DLGKPAIGMD DFDEAIDRAM TGLERKSRVM
NAQEKLTIAY HEAGHALVAE SRAYCDPVKK VSIIPRGVAA LGYTQQVPTE DRYVLRRSEL
LDRIDALLGG RVAEELVFGD VSTGAQNDLE RATAMARHMV MQYGMSEKIG LMSFDDGEAR
SGIPGAWHAG EGRCSEHTAR VIDDEVHTLL TDAHARVAAT LGARRDALER IARRLLACEV
LERDALQALI DGREVPASEP SMIDCGPCTG VNAPGQASAA EHDFVACGPP REPER
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