| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3863 |
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| Symbol | |
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| ID | 4312759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 751285 |
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| End bp | 753069 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151705 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_775751 |
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| Protein GI | 115358613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.132833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.716613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CGACCCATCT CGGCGGCGCG CTGCCGCCGC TTCCTTCGTC CCGCGTCCGC
GACGCCGGCA CGCGCCTGCG CATCGTGCCG GCCCGCCACC GCTCGCGCAC GGCCGGCACC
GTGCTCGCGC TCGTGCTGAT CGCGCTCGCG CTGCATTCGA TCCTCGGCAA CCCGCAATGG
GGCTGGCCGG TATTCGCCGA ATGGTTTCTG TCGCCGCCGG TGCTGTCCGG ACTCGCGCGC
ACGCTGGTGC TGACGCTGCT CGGCGCGGTG TTCGGCTTCG CGCTCGGCGC GTTCGTCGCG
CTGGCGCGGC TGTCGCGTTC GCGCCTGCTC GCCGCGAGCG CGTGGACCTT CGTGTGGCTG
TTCCGGTCGA TTCCGCTGAT CGTGCTGCTG CTGATCCTCA ACAACCTCGG CTACCTGTAC
GAACACGTGC GGCTCGGCGT GCCGTTCACC GACATCGTGT GGTTCGACAC GCCGACCACC
GACCTGATCA GCCCGTTCCT CGCGGCCGTG CTCGGCCTCA CGCTGAACCA CGCGGCGTTT
TCCGCCGAGG TGATCCGCGG CGGCATTCTC GCGGTCGACC AAGGGCAGCT CGAAGCCGCC
GCCGCGCTCG GCCTGCCGCG CGGTCGCCAG ACTACGCGGA TCGTGCTGCC GCAAGCGATG
CGCGCGATCC TGCCGACCGC GTTCAACGAT CTCATCTCGC TCGCGAAAGG CACGTCGATG
GTGTACGTGC TCGCGATGCC CGAGCTGTTC TATACGGTGC AGGTGATCTA TCGCCGCAAT
CTCGAAGTGA TTCCGCTGCT GATGGTCGCG ACCGTCTGGT ATCTGATCAT CCTGACCGTG
CTGTCGGCGA TCCAGGTTCA GGTCGAGCGC CACTACGCGC GGGGGGCGTT GCGCAACCCG
CCGCCGTCGG CACTGACGTT CGTGCTGGCG CGCATCGGTG CGCTATGGCG GCGTGCCGCG
GCACGCCACG CGACAACCAC CGCAACGGCA CGCGGCGACG CCGCGGCAGC GCCGCTGCCG
AGCGTCGGCG GCGAAGTCGC CGTGCACAAC GTATCGAAAC AGTTCGGCAT GCAGCGCGTG
CTCGACAACG TGTCGTTCGT CGCGCCGCGC GGCAGCGTGA CGGCGATCAT CGGGCCGTCC
GGGTCGGGCA AGTCGACGCT GCTGCGCACG ATCAACCATC TGGAACGCGT CGACGACGGC
TTCATCGACA TCGACGGTGA GCTGATCGGC TATCGGCGCG ACGGCGACGT GCTGCACGAG
CTGAAGGAGC GCGACGTGCT GAAGCGGCGC ACGGCGGTCG GCATGGTGTT CCAGAACTTC
AACCTGTTTC CGCACTTGAC CGTGCTCGAG AACCTGGTGG AGGCGCCCGT CGCCGTCGCG
GGCATCACGC GCGAGGCCGC CGAGCGCACC GCGCGTACGC TGCTCGCGCG TGTCGGCCTC
GCGGATAAAG CCGATGCCTA CCCGCGCCAG CTATCCGGCG GCCAGCAGCA GCGCGTCGCG
ATCGCGCGGG CGCTCGCATT GCGCCCGAAG GTGCTGCTGT TCGACGAGCC GACGTCGGCG
CTCGATCCCG AACTGGTCAA CGAAGTGCTC GACGTGATCA AGGAACTCGC ACGCTCGGGC
ACCACGCTCG TGATCGTCAC GCACGAGATC GGCTTCGCGC GCGAAGTCGC GGACAACGTG
CTGTTCATGG AGCGCGGCCG CGTCGTCGAA TCGGGCCCGC CCGCCGTTGT GCTCGACGCG
CCGGCCCATC CGCGCACGCG CGCGTTCCTG TCGCGGGTGC TGTGA
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| Protein sequence | MSDTTHLGGA LPPLPSSRVR DAGTRLRIVP ARHRSRTAGT VLALVLIALA LHSILGNPQW
GWPVFAEWFL SPPVLSGLAR TLVLTLLGAV FGFALGAFVA LARLSRSRLL AASAWTFVWL
FRSIPLIVLL LILNNLGYLY EHVRLGVPFT DIVWFDTPTT DLISPFLAAV LGLTLNHAAF
SAEVIRGGIL AVDQGQLEAA AALGLPRGRQ TTRIVLPQAM RAILPTAFND LISLAKGTSM
VYVLAMPELF YTVQVIYRRN LEVIPLLMVA TVWYLIILTV LSAIQVQVER HYARGALRNP
PPSALTFVLA RIGALWRRAA ARHATTTATA RGDAAAAPLP SVGGEVAVHN VSKQFGMQRV
LDNVSFVAPR GSVTAIIGPS GSGKSTLLRT INHLERVDDG FIDIDGELIG YRRDGDVLHE
LKERDVLKRR TAVGMVFQNF NLFPHLTVLE NLVEAPVAVA GITREAAERT ARTLLARVGL
ADKADAYPRQ LSGGQQQRVA IARALALRPK VLLFDEPTSA LDPELVNEVL DVIKELARSG
TTLVIVTHEI GFAREVADNV LFMERGRVVE SGPPAVVLDA PAHPRTRAFL SRVL
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