Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3856 |
Symbol | |
ID | 4312752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 743495 |
End bp | 744568 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638151698 |
Product | succinylglutamate desuccinylase/aspartoacylase |
Protein accession | YP_775744 |
Protein GI | 115358606 |
COG category | [R] General function prediction only |
COG ID | [COG3608] Predicted deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.404909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGACT CCCGTTCTTC GAACGATGTC GCCATGACCG CCTCCTCCTC TTCGTCACAC CGAAATCCCA TCCACTGCGA AATCGATCTC GATGCGCAAG GCAAGCATGC GGGCTACCTG CGCCTGCCGC ATTCCGTGCA TCGCTCCGCG TACGGCTGGC TACCGATCCC GATCGCGTCG ATCCGCAACG GCGACGGCCC GGTCGCGCTC GTGATGGCCG GCAATCACGG CGACGAATAC GAAGGCCAGA TCATCGTGTC GCAGCTGATC CGCGAGATCG ACCCGGAGAT GGTCAGCGGG CAGCTGATCC TGCTGCCGAT GGCGAACTTC CCCGCGGCCG ACGCGGGCCA GCGCGTGTCG CCGCTCGACG AGGGCAACCT GAACCGCAGC TTCCCCGGCG ACCCGACCGG CACGCCGACG CAGATGATCG CCCACTACAT CGAGCATGCG CTGCTGTCGC GCGCGCAGTA TCTGGTCGAC CTGCATTCGG GCGGCAGCTC GTTGCTGTAC CAGGGCGGCA ACATGCTCGC GATCGACCCG CTCGACGACG ACGAGGCAGA GAAGCTCAAC GGGCTGCTCG TCGCGTTCGG GTTGCCGAAC GCGCTGCTGC ACGCGCCGAA CCCGGTGCAT TCGGCCTCGG CCGCGCGCCG GCAGGGCGCG ATCTCGATCG TCACCGAACT CGGCGGCGCA GGCATGGCCG ATCCGTCGCT GATTCGGCTC GGCCGCCACG GGCTGCTGCA CTACCTCGGC CATATCGGCT TGCTGCACGG CGCGCTCGTG CCCGACGCGC CGCCGACCGT CACGCGCTTT CTGCGCGTCG ACGGCGATCG CCACTTCGTC TATGCGTACG AACGCGGGCT GTATGAACCG CTCGTCGAAC TCGGCGACCA GGTGAAGGCC GGACAGCCGG CCGCGTGGGT GCACTTCCCC GATACGCCGC TGCGCGAACC GGTGCTGTAT CGCTTCAAGG GCGACGGCGA AGTGGTGTGC AAGCGCGTGC CGGCGCAGGT GCAGCGTGGC GATTGCCTGT TTCAGCTGGC GGAGGCGTCG ACGCCTCCGC GTGTCATCGC GTGA
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Protein sequence | MADSRSSNDV AMTASSSSSH RNPIHCEIDL DAQGKHAGYL RLPHSVHRSA YGWLPIPIAS IRNGDGPVAL VMAGNHGDEY EGQIIVSQLI REIDPEMVSG QLILLPMANF PAADAGQRVS PLDEGNLNRS FPGDPTGTPT QMIAHYIEHA LLSRAQYLVD LHSGGSSLLY QGGNMLAIDP LDDDEAEKLN GLLVAFGLPN ALLHAPNPVH SASAARRQGA ISIVTELGGA GMADPSLIRL GRHGLLHYLG HIGLLHGALV PDAPPTVTRF LRVDGDRHFV YAYERGLYEP LVELGDQVKA GQPAAWVHFP DTPLREPVLY RFKGDGEVVC KRVPAQVQRG DCLFQLAEAS TPPRVIA
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