Gene Bamb_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3856 
Symbol 
ID4312752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp743495 
End bp744568 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content68% 
IMG OID638151698 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_775744 
Protein GI115358606 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.404909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACT CCCGTTCTTC GAACGATGTC GCCATGACCG CCTCCTCCTC TTCGTCACAC 
CGAAATCCCA TCCACTGCGA AATCGATCTC GATGCGCAAG GCAAGCATGC GGGCTACCTG
CGCCTGCCGC ATTCCGTGCA TCGCTCCGCG TACGGCTGGC TACCGATCCC GATCGCGTCG
ATCCGCAACG GCGACGGCCC GGTCGCGCTC GTGATGGCCG GCAATCACGG CGACGAATAC
GAAGGCCAGA TCATCGTGTC GCAGCTGATC CGCGAGATCG ACCCGGAGAT GGTCAGCGGG
CAGCTGATCC TGCTGCCGAT GGCGAACTTC CCCGCGGCCG ACGCGGGCCA GCGCGTGTCG
CCGCTCGACG AGGGCAACCT GAACCGCAGC TTCCCCGGCG ACCCGACCGG CACGCCGACG
CAGATGATCG CCCACTACAT CGAGCATGCG CTGCTGTCGC GCGCGCAGTA TCTGGTCGAC
CTGCATTCGG GCGGCAGCTC GTTGCTGTAC CAGGGCGGCA ACATGCTCGC GATCGACCCG
CTCGACGACG ACGAGGCAGA GAAGCTCAAC GGGCTGCTCG TCGCGTTCGG GTTGCCGAAC
GCGCTGCTGC ACGCGCCGAA CCCGGTGCAT TCGGCCTCGG CCGCGCGCCG GCAGGGCGCG
ATCTCGATCG TCACCGAACT CGGCGGCGCA GGCATGGCCG ATCCGTCGCT GATTCGGCTC
GGCCGCCACG GGCTGCTGCA CTACCTCGGC CATATCGGCT TGCTGCACGG CGCGCTCGTG
CCCGACGCGC CGCCGACCGT CACGCGCTTT CTGCGCGTCG ACGGCGATCG CCACTTCGTC
TATGCGTACG AACGCGGGCT GTATGAACCG CTCGTCGAAC TCGGCGACCA GGTGAAGGCC
GGACAGCCGG CCGCGTGGGT GCACTTCCCC GATACGCCGC TGCGCGAACC GGTGCTGTAT
CGCTTCAAGG GCGACGGCGA AGTGGTGTGC AAGCGCGTGC CGGCGCAGGT GCAGCGTGGC
GATTGCCTGT TTCAGCTGGC GGAGGCGTCG ACGCCTCCGC GTGTCATCGC GTGA
 
Protein sequence
MADSRSSNDV AMTASSSSSH RNPIHCEIDL DAQGKHAGYL RLPHSVHRSA YGWLPIPIAS 
IRNGDGPVAL VMAGNHGDEY EGQIIVSQLI REIDPEMVSG QLILLPMANF PAADAGQRVS
PLDEGNLNRS FPGDPTGTPT QMIAHYIEHA LLSRAQYLVD LHSGGSSLLY QGGNMLAIDP
LDDDEAEKLN GLLVAFGLPN ALLHAPNPVH SASAARRQGA ISIVTELGGA GMADPSLIRL
GRHGLLHYLG HIGLLHGALV PDAPPTVTRF LRVDGDRHFV YAYERGLYEP LVELGDQVKA
GQPAAWVHFP DTPLREPVLY RFKGDGEVVC KRVPAQVQRG DCLFQLAEAS TPPRVIA