| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3848 |
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| Symbol | |
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| ID | 4312744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 732740 |
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| End bp | 733996 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151690 |
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| Product | porin |
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| Protein accession | YP_775736 |
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| Protein GI | 115358598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCCT ACCAAATCGG CCGGCGTGCC AGCGCGCGTG CCGCCGCGCC GCATGCCGTC
CGCCGCCACC ACCGCACCGT CGCCCTCCCC GCGACCGCGA TTGCCGCCTG CGTGGCCGGC
TTGATTCCGT GCATCGCGCA CGCGCAGAGC AGCGTCACGC TGTACGGCCT GATCGACACG
TCGATCACCT ATGCCACCAA TCAGCGTACG CAAGACGCCG GTTCGCCGGG CAGCGGCAGC
GTCGCGCTGA CGAGCGGCGC ATTGAACGCA TCGCGCTGGG GGCTGCGCGG CCGCGAGGAT
CTCGGTGGCG GGACGGCGGC GGTCTTCGCG CTCGAAAACG GCTTCTCCGG CACGACCGGC
AAGCTGTCGC AGAAAGGCGT CGACATGTTC GGTCGCCAGG CATGGGTCGG CGTGAGTTCG
CGTACGGCCG GCACGCTCAC GTTCGGCCGC CAGTACGACC CGATCCTCGA TTTCGTGACG
CCGCTCGGCG CGTCGGGCCC GGGCTGGGGC GGCAATCTCG CGGTGCACCC GTACGACAAC
GACGACTCGA ACCGCAACCT GCGCATCAAC CACGCGGTGA AGTACACGAG CGCGACGTAT
CGCGGGCTGA CGTTCGGCGC GCTGTACGGG TTCTCGAACA CGGCCGGCGC GTTCTCGAAC
AACGCAGTAT GGAGCGCGGG GCTCGGCTAT GCGAACGGGC CGCTGAAGCT CGGCGCCGGT
TACCTGAAGA TCAGCCGCGA CCGCAACGCG CCGAACCCGG ACGGTGCACT GAGCACGGTC
GACGGCTCCG CGACGATCAC GGGCGGCAAC CAGCAGATCT GGGCCATGGC CGGCCGCTAT
GCGTTCGGCC TGCATTCGGT CGGCGCCGCG TGGTCGCACT CGGCCACCGA CGGCGTGAGC
GGCGTGCTCC AGGGCGGCGG CATCACGCCG CTGAAGGGCA AATCGCTGGT CTTCGACAAT
TTCACGGTCG ACGGCCGCCT CTTCGTCACG CCGGCGTTCA GCCTGTCCGC CGCGTACACG
TACACGATGG GCCGATTCGA CACGCGCACC GGCCAGACGC GCCCGAAATG GAACCACGTG
GTCACGCAGG CCGGCTATGC GTTCTCGCCC CGCACGGACG CGTATCTCGA AGCCGTCTAT
CAAAGCGTGA GCGGCGGCAA CGGCAATCCC GCGTTCAACG CGACCGTCTG GACGATGACG
CCGTCCGCCA ACAGCAACCA GCTGGTGGTC GCGCTCGGGT TGCGGCACAA ATTCTGA
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| Protein sequence | MYSYQIGRRA SARAAAPHAV RRHHRTVALP ATAIAACVAG LIPCIAHAQS SVTLYGLIDT
SITYATNQRT QDAGSPGSGS VALTSGALNA SRWGLRGRED LGGGTAAVFA LENGFSGTTG
KLSQKGVDMF GRQAWVGVSS RTAGTLTFGR QYDPILDFVT PLGASGPGWG GNLAVHPYDN
DDSNRNLRIN HAVKYTSATY RGLTFGALYG FSNTAGAFSN NAVWSAGLGY ANGPLKLGAG
YLKISRDRNA PNPDGALSTV DGSATITGGN QQIWAMAGRY AFGLHSVGAA WSHSATDGVS
GVLQGGGITP LKGKSLVFDN FTVDGRLFVT PAFSLSAAYT YTMGRFDTRT GQTRPKWNHV
VTQAGYAFSP RTDAYLEAVY QSVSGGNGNP AFNATVWTMT PSANSNQLVV ALGLRHKF
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