Gene Bamb_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3840 
Symbol 
ID4312736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp712311 
End bp713315 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content59% 
IMG OID638151682 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_775728 
Protein GI115358590 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.44173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAG GAAGTCCTAT CTCCCGCGAG GGCCAGGGCT ATCTCTTCAA TCCGAGCATC 
TATTCAGACG AACAGGTAGC CGGGTGGAAG TTGACCACGG ACTCGGTTCA TGCCGTCGGC
GGCAAGATTT TCGCGCAACT GTGGCACGTG GGTCGTGTAT CGCACACCAG CCTCCAGCCT
GATGGTGGTG CGCCACGCAG CGCCACGTCA CGGCTTGCAA AAGACTCGAT CGTGTTTGCT
TACGACTCCA ACGGGAAGCC GGGGTTCGTC CCGACGTCAA CGCCGTCCGC ATTGTCGACG
ATGGAGGTCG AGCGCGTGGT CGAGGACTTC GTTTCCGCTG CGTCCAACGC CATCGAGGCC
GGATTCGACG GCGTGGAAAT CCACGCGGCC AACGGATATC TGTTCGAGCA GTTTCTGAAT
CCGCTGGTCA ACGATCGCAC TGACCGCTAT TCAGCGACGA CGCGCGAAAA TCAGTTGCGC
TTCGCGCTGG AAGTCGTTGA CGGCATTGCC GAACGTATCG GCACCGGCAA AATAGGCATC
CGGATTTCAC CGTATGGGCA GCTATTCGAT ATGCCGCACT ACCCGGGCAT TCTCGATACC
TATGGCGCGC TTGCGTTCGA GCTCGGCATG CGGCGCATCG CATATATCCA CGTGATGGAT
CAGTCGAACG TCTCGGTGGC ACCCAAAGAC GACACCGCGT CGGACGATCG CACGATCGAA
CTGCTGTCCC GCATCAAGCG CGAGGCCGGC AACACGCCGA TCATCCTCGC AGGTGGGATG
ACGATCAACC GTGCGCAGGC ACTTCTTGAT GACGGTCTGA TCGATCTCGC TGCCTTTGGA
CAGCCATTCA TTGCAAATCC GGATCTCGTG CACCGACTCA AAACCGGATT GCCGCTCGCT
ACCGCCGATC GAGCAACGTA TTACGGTGGC GGCCTGAAGG GCTATGTCGA TTACCCGCCG
TTCGGTGCGC AATTTGCAGC GGAACCGCTC GAAAACATCA CGTGA
 
Protein sequence
MTEGSPISRE GQGYLFNPSI YSDEQVAGWK LTTDSVHAVG GKIFAQLWHV GRVSHTSLQP 
DGGAPRSATS RLAKDSIVFA YDSNGKPGFV PTSTPSALST MEVERVVEDF VSAASNAIEA
GFDGVEIHAA NGYLFEQFLN PLVNDRTDRY SATTRENQLR FALEVVDGIA ERIGTGKIGI
RISPYGQLFD MPHYPGILDT YGALAFELGM RRIAYIHVMD QSNVSVAPKD DTASDDRTIE
LLSRIKREAG NTPIILAGGM TINRAQALLD DGLIDLAAFG QPFIANPDLV HRLKTGLPLA
TADRATYYGG GLKGYVDYPP FGAQFAAEPL ENIT