| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3813 |
|---|
| Symbol | |
|---|
| ID | 4312709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 684102 |
|---|
| End bp | 684572 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638151655 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_775701 |
|---|
| Protein GI | 115358563 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.175974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.56362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAAA GGATCCTCGT GGCACTCGAC GGCAGCCACA GCGCGCGGCT CGCGCTCGAC
GAGGCGATTT CGCTCGCGCG CCATTCGGGC GGCCGGGTCA TCGCCACGTG CGTGGTATCG
GACGCGCTCC GGCCGGCCAG CGTCGACAAC GGCGATGTCG ATCAGCGCGA CTCGAGCGGA
CTGGACGCGA AAAACGCCGC GACCGCGATC TCGGACGCGG AAGCCGCGTT TCGGCGGTCC
GGCGTGCGCG GCATCGCGCG CACGATCGAT GCGTGTGGAG CGGGCATTTC GGACGTGCTG
GCGCGCGCCG CCGCCGAATG CGATGCGGAC CTGATCGTGA TGGGCACGCA TGGCCGTCGC
GGGCTGCGCC GGGCGTTGCT CGGCAGCGTC GTCGAAGCGC TGGTGCGCAT CGCGGATCGG
CCGGTGCTGG TCGTGCGGGA AGGGCCGGGC GCGGGCGCCG ACCTGTCGTG A
|
|---|
| Protein sequence | MYQRILVALD GSHSARLALD EAISLARHSG GRVIATCVVS DALRPASVDN GDVDQRDSSG
LDAKNAATAI SDAEAAFRRS GVRGIARTID ACGAGISDVL ARAAAECDAD LIVMGTHGRR
GLRRALLGSV VEALVRIADR PVLVVREGPG AGADLS
|
|---|
| |