| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3802 |
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| Symbol | |
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| ID | 4312698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 672478 |
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| End bp | 673248 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151644 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_775690 |
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| Protein GI | 115358552 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.729894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCGACCTCGA CCGACGCGAC TGGATCGCCG GCCTCGAAAA AGGCCTGGCG
ATCCTGGAAG CGTTCGACAG CCAGCACGCG CGGATGACGC CCACCCAGGC CGCCGCCCGC
ACCGGGCTCA CGCGCACGGC CGCGCGGCGT TACCTGCTGA CGCTCGAATC GCTCGGCTAC
GTGTACACCG ACGGCAAGCT GTACGGCCTC ACGCCGCGCG TGCTGCGGGT CGGCTGGTCG
TACTTCGATT CGGCGCGGCT GCCGCGCACG GTCCAGCCGT ATCTGCAGCA ACTGAGCGCG
TCGCTGAACG AATCGGCGTA CGTGAGCGTG CTCGATGGCT GGCAACTCGT GTTCATCGCC
CGCAACGGCG TGTCGCGCGT GATGACGACC GGCTTCGTGC TCGGCGCACG CGTGCCGGCG
CCGCTGACGT CGCCCGGCGT CGTGCTGCTC GCCCATCATC CGGATCGGGA GGCCGTCCGC
GCGTGGCTCG CCGACGCCGA ACTCGCCCCG TTCACGCCGC ACACGATCAC CAACAAGGCA
CGACTGCTCG AACAGGTCGA CCACGCGCGC GACGCGGGCT TCGCGGTCAT CGAGCAGCAA
TTGCAGGTCG GCGTGCGCGG CATCGCGGTG CCGTTGAAGA ACCGTCATGG CGAAGTCGTC
GCCGCGCTGA GCACGAACAT GCCGATCGGC ACGGAAGCGA CGGACGCGGC CGTGCGGCGC
GTGCTGCCGC ATCTGCAGGA AGCCGCGCTC GCAATGCTCA ACGTGCTGTA G
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| Protein sequence | MKKTDLDRRD WIAGLEKGLA ILEAFDSQHA RMTPTQAAAR TGLTRTAARR YLLTLESLGY
VYTDGKLYGL TPRVLRVGWS YFDSARLPRT VQPYLQQLSA SLNESAYVSV LDGWQLVFIA
RNGVSRVMTT GFVLGARVPA PLTSPGVVLL AHHPDREAVR AWLADAELAP FTPHTITNKA
RLLEQVDHAR DAGFAVIEQQ LQVGVRGIAV PLKNRHGEVV AALSTNMPIG TEATDAAVRR
VLPHLQEAAL AMLNVL
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