Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3782 |
Symbol | |
ID | 4312678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 652105 |
End bp | 653865 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638151624 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_775670 |
Protein GI | 115358532 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.627469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.463538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA TTAAACGGCT GGTAGCGGTG CCGCTCACTG CTTTTGTATC GCTTGCGGCG CAAGCGCAAC AAGCGCCCAC GCCTGCCGAC CAAGCCGCAG CAGCGCGCGC GAATGCTGAA CAGGATCGGC AGGCGCAGCA GCAACGTGAC GCGCAGCAGC GTGATGCTAC CGTGCGCGCC CCGTCCGTTC GTTCGGAAGT GCCGCAGGTC GAAATGTATC CCGTGATACC GAGCGAGCAG CCGTGTTTCC GCATCGACCG TTTTGCGCTC GACGTCCCGG ATTCGCTGCC GGATTCCGCG AAGGTGAAAG GAGCCTCCGC CTTGCCGATG GATCGCTTTG CATTCGCACG CGAATGGCTC GCCCACTACG CCGGTCAGTG CGTCGGCAAG CAAGGCGTCG ATACGATCGT CAAGGGGCTG TCTCGGGCGA TCCTGGCGCG CGGTTACATC ACAACGCGCG TCCTGCTACC AGAACAGGAT TTGTCGACTG GCACGCTGAA AGTTGCACTG ATTCCCGGCG TGATCCGACA CGTGCGCTTC GCCGACGAAA AATTGCGAGG AACATGGAAA ACCGCGTTCC CAACACGCGA CGGCGAAGTG TTGAACCTGC GCGACCTTGA GCAAGGTCTA GAGCAGATGA AGCGCGTTAC GAGTCAGGAC GTGTCGATGC AGATCGTTCC GGCTGACGTG CCGGGTGAAA GTGATGTCGT GCTCGACGTG AAGCGCAGCA AGCCGTGGAC CGCCGTCGCA TCGATCGACA ACTCGGGCAC GCGCGCGACC GGCAAGCTAC AGGGCAACCT GTCGATTGGC GTCGATAACC CGCTCGGGCT AAACGACATA TTCAACATCG GCGTGAGCCA AGACCTCGAA CTCGGCGACA AGCGCCTTGG TTCGCACGGT TGGAACGGTT TCTATTCGAT TCCATGGGGA TACTGGACCG CGACGTTATC GGCCTACACG AACACGTACT ACCAGCAGAT CGCGGGCGTT AATCAGACAT TCGTGGCGAG CGGGAACTCC AAGACGATTG ATTTCAAACT GGCACGCGTG CTTGCACGCA GTCAGAACGA CGTGTTGGGC GGCTATTTCC GCTTGTCGCG CCGCTTCGGT CAGAGCTTCA TTGAAGATAC GGAAATCCCG CAACAGCGGC GCAACAACAC GTTCGTAGAA ATCGGCCTGA CAGATCGCCA TTACTTCGAC GGGGCGCAGT TCGACGGCAC GCTGGCTTAT CGTCAGGGTG TCGGCGGCTT GGGTGCTCAG GACGACATTC TTGCTACCGG GGGCGGTCCG ACTTACCGCT TCAAGATGGC GGTGCTCGAT GCGAACCTGT CGGTGCCGTT TGCCATTGCG GCGCAGCCGT TCCGATACGT TACGAGCATT CACGGTCAAT ATACGGGGAA CTCGCTGTAC TACATCGACG ACTTGACGAT CGGCAGTCGC TACACAGTTC GGGGATTCGA CGGTGAAACG ATGCTGGCGG CGGCACGTGG CCTCTACTGG CGCAACGAGT TGCAGATGCC GATCGGCCAA ACAGGGCAGA TAGTGTACGC AGGCCTCGAC TACGGCCGCG TATGGGGACC GCAACCGGTG GCGCTGGTCG GTACGCAGTT GGCCGGTGCA GTGATTGGCG TTAAGGGCAG CGTCGCGACG CGCTTTGGTG GCTACGGTTA CGACTTGTTT GCAGGTACGC CGGTCTACAA GCCGTCCGGA TTTCCGACGG CGCGCGTGAC AGTTGGATTT CAGGTGACGG CGCAGTTTTG A
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Protein sequence | MKIIKRLVAV PLTAFVSLAA QAQQAPTPAD QAAAARANAE QDRQAQQQRD AQQRDATVRA PSVRSEVPQV EMYPVIPSEQ PCFRIDRFAL DVPDSLPDSA KVKGASALPM DRFAFAREWL AHYAGQCVGK QGVDTIVKGL SRAILARGYI TTRVLLPEQD LSTGTLKVAL IPGVIRHVRF ADEKLRGTWK TAFPTRDGEV LNLRDLEQGL EQMKRVTSQD VSMQIVPADV PGESDVVLDV KRSKPWTAVA SIDNSGTRAT GKLQGNLSIG VDNPLGLNDI FNIGVSQDLE LGDKRLGSHG WNGFYSIPWG YWTATLSAYT NTYYQQIAGV NQTFVASGNS KTIDFKLARV LARSQNDVLG GYFRLSRRFG QSFIEDTEIP QQRRNNTFVE IGLTDRHYFD GAQFDGTLAY RQGVGGLGAQ DDILATGGGP TYRFKMAVLD ANLSVPFAIA AQPFRYVTSI HGQYTGNSLY YIDDLTIGSR YTVRGFDGET MLAAARGLYW RNELQMPIGQ TGQIVYAGLD YGRVWGPQPV ALVGTQLAGA VIGVKGSVAT RFGGYGYDLF AGTPVYKPSG FPTARVTVGF QVTAQF
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