Gene Bamb_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3770 
Symbol 
ID4312666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp630503 
End bp633115 
Gene Length2613 bp 
Protein Length870 aa 
Translation table11 
GC content70% 
IMG OID638151612 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_775658 
Protein GI115358520 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.345724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.277872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCAG TGCGTGATCT CTGTGCCAAA TGGGTCGCGC GCGCCCAACC CGTCGCGGCC 
GCTGCCGCCG TGCCCGTCAA GCGTGTCCTG GCCACCGCCT GGCGCCGTCT CCGTCATCCG
ACGCGCCGCG GCGTGCTGCT CGCGGCCGCC GCCGTGCCGG TGCTGTTCCT GCTGTACGTA
CTGGCGCTGA TTCCGTTCAC GCCGGGCATC GGCGACATTC GCAAGGCACG CGTCGACCAG
CCGGCGCAGG TGCTGTCCGC CGACGGCAAG CTGCTGGCGG AATTCAAGCC GTCGAACCGC
GAATGGGTGC CGCTCAAGCA GATTTCGCCG CACATGGTCG ATGCGCTGAT CGCGACCGAG
GATCACCGCT TCTACGAGCA CCACGGCCTC GACTGGAAGC GCACGGCGTC GGCCGCGCTC
CATACGTTCT CCGGCAACCG CCAAGGCGGC TCGACGATCA CGCAGCAGCT CGCGCGCAAC
CTGTATCCGG ACGAGATCGG CCGCGCGCCG ACGCTCACGC GCAAGGTAAA GGAGGCGATC
ACCGCGCTGA AGATCGAGGC CATCTACAGC AAGCCGCAGA TCCTCGAGAC CTACCTGAAC
ACGGTGCCGT TCCTGTACAA CGCGTACGGT GTCGAGATGG CCGCGCGCAC CTATTTCGAC
AAGTCGGCCG ACCAGCTCGA CGTGCTCGAC AGCGCGACGC TCGTCGGGAT GCTGAAGGGC
AACAGCTACT ACAACCCGGT GCTGAACCCC GAGCGCGCAC TGCAGCGGCG CAATACGGTG
CTCGGCCAGA TGGTGAAGTA CGGCAAGCTG TCGCCGGCGC AGTTCGCGCA GCTGCAGCGC
CGGCCCCTGC GCGTCGATTT CGAGCGCCAG AAGGAGCCGC CGGGGCCCGC GCCGCATTTC
GCGCAGCAGT TGCGCAAATG GTTGATCGGC TGGGCCGACC GCAACGACTA CAACATCTAT
TCGGACGGGC TGATCGTGCG CACCACGATC GATGCGCGGC TGCAGCAGAT GGCGACCCAG
GCGCTGACGC AGCAGGCGAA CCAACTGCAG GGGATCGCGA ACAACGCGTG GAGCGGCCGC
GACGGCTGCG GCACCGATAA CGAGGTGTTC CGCACCTTCA TGCGCGAGTC GCCCGAGTAC
AAGGCCGCGC AGGACGCCGG CAAGGACGAT GCGGCCGCGA TGAAGCAGCT CGCCGCCGAC
CGAGGTTTCA TGCGCGCGCT GTGCAAGGCG AAGACCGACG TGCAGGCCGG CTTCGTCGCG
ATCGATCCGC GTGACGGGCA GATCCGCGCG TGGGTCGGCA GCCGCGACTT CACGAACGAG
CCGTTCGATC ACGTGTCGCA GGCACGGCGC CAGCCGGGTT CGACCTTCAA GCCGTTCGTC
TATGGCGCCG CGTTCGCGAA CGGGATGAAG CCGGAGGACA CGTTCGTCGA CCAGGCGATC
GAGATTCCAC TGAAGGGCGG CGAGATCTGG CGCCCGAACG ACGATGCACC GCCCACCGGC
AAGCCGATGA CGCTGCGCGA CGCGGTCGCG CTGTCGCGCA ACCGGATCAC CGCGCAGGTG
ATGGAGAAGG TCGGCCCGGC GGCCGTCGCG CGGCTCGCGC GCGACATGGG CGTGCGCGAG
AGCCCGCTCG AGCGTGTGCC GTCGCTCGCG CTCGGCACGA GCCCCGTGAC GCTGAAGGAG
ATGGTCGCGT CGTACGCGAC GATCGCGAAC GGCGGGCTGT ACGTCGAGCC GCAAATGGTC
ACGCGCATCG AGACCCGCCA GGGCGACGTG CTCGCCGAAT ACGCGCCGAC GCCGCCCGAG
CGCGCGCTCG ACGCGGAAAC CGACAAGACG CTGCTCGACG TGATGCGCGA CGTCGTGACG
CGCGGCACCG GCGGCAGCAT CCGTACGCGC TTCGGGATTC GCGGCGACGT GGCCGGCAAG
ACCGGCACCA CGCAGGACAA CGCGGACGGC TGGTTCATCC TGATGCAGCC GGGGCTGGTC
GCCGGCGCGT GGGTCGGCTT CGACGACGGC CGCGTGACGC TGCGCAGCGA CTACTGGGGG
CAAGGCGCGC ACAGCGCGCT GCCGATCGTC GGCGACTTCT TCCAGCGCGC GCAACGGGCG
CGGATCGTCG ACACGAAGCT GAAATTCGAT ACCGAGCCGT CGCCCGGCTG GTTCGCGTCG
GCGCGCGAAC GGGTGACGGA CCTGTTCGAC GGCTGGTTCG GCCCCGAATC GAAGCAGGAG
CCGGCGCCCG TGAGGACCCA GCGTATCGAG CGTCAGCCCG ACGAGGACAC AGACGAGGCG
TCGGCCGCGT CCGCCGCGTC GGCACCCGTG CCGGCATCCG GCGGCGTCGT CGAGGAATGG
ATCCCGGCGT CGGAGGTGGC GGCGTCGGCC GCCGCGTTGT CGGCGGGCGC GTCGCAATCG
CAGCCCGTGC AGCCGCCGGC GGCGGGGGGA GGCAGCGCGG CGAGTTCCGG CAATACCGGT
GGCGGCGGCC TCGGCTCCGC ACCGGCCACG GCGCCTTCCA CCGTGCCGGC ACCTTCACCT
TCACCGGCTC CGGCACCTTC ACCGACGCCG GCACCTTCAC CGACGCCGGC ACCGGCGCCC
GCTTCACCCG ACGCGACCAG CGGTTCGGAG TAA
 
Protein sequence
MSSVRDLCAK WVARAQPVAA AAAVPVKRVL ATAWRRLRHP TRRGVLLAAA AVPVLFLLYV 
LALIPFTPGI GDIRKARVDQ PAQVLSADGK LLAEFKPSNR EWVPLKQISP HMVDALIATE
DHRFYEHHGL DWKRTASAAL HTFSGNRQGG STITQQLARN LYPDEIGRAP TLTRKVKEAI
TALKIEAIYS KPQILETYLN TVPFLYNAYG VEMAARTYFD KSADQLDVLD SATLVGMLKG
NSYYNPVLNP ERALQRRNTV LGQMVKYGKL SPAQFAQLQR RPLRVDFERQ KEPPGPAPHF
AQQLRKWLIG WADRNDYNIY SDGLIVRTTI DARLQQMATQ ALTQQANQLQ GIANNAWSGR
DGCGTDNEVF RTFMRESPEY KAAQDAGKDD AAAMKQLAAD RGFMRALCKA KTDVQAGFVA
IDPRDGQIRA WVGSRDFTNE PFDHVSQARR QPGSTFKPFV YGAAFANGMK PEDTFVDQAI
EIPLKGGEIW RPNDDAPPTG KPMTLRDAVA LSRNRITAQV MEKVGPAAVA RLARDMGVRE
SPLERVPSLA LGTSPVTLKE MVASYATIAN GGLYVEPQMV TRIETRQGDV LAEYAPTPPE
RALDAETDKT LLDVMRDVVT RGTGGSIRTR FGIRGDVAGK TGTTQDNADG WFILMQPGLV
AGAWVGFDDG RVTLRSDYWG QGAHSALPIV GDFFQRAQRA RIVDTKLKFD TEPSPGWFAS
ARERVTDLFD GWFGPESKQE PAPVRTQRIE RQPDEDTDEA SAASAASAPV PASGGVVEEW
IPASEVAASA AALSAGASQS QPVQPPAAGG GSAASSGNTG GGGLGSAPAT APSTVPAPSP
SPAPAPSPTP APSPTPAPAP ASPDATSGSE