| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3768 |
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| Symbol | |
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| ID | 4312664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 628122 |
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| End bp | 629243 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151610 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_775656 |
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| Protein GI | 115358518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000114958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.108164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATACC TCATTACCGC GCTCTCGGTG GCCGTGGCCG CCGGCGCGCT GACTTCCGCG
CACGCGCAGG AAGTCGTGAC GATCGGCCAC TCGGCGCCGC TGACCGGCCC GCAGGCCGCA
AACGGCAAGG ACAACGAAAA CGGCGCGCGC CTCGCGGTCG ACGAGCTCAA CAAGGCGGGT
GTGAAAGTGG CCGGCAAGAC GGTCACGTTC AAGCTGGTGT CCGACGACGA CCAGGCCGAC
CCGAAGGCGG GCGTGCAGGT CGCGCAGAGC CTGGTCGACA AGGGCGTCGT CGCGGTGCTC
GGCCCGTACA ACTCGGGCGT CGCGATTCCC GCGTCGCGCG TGTACGCCAA TGCCGGCGTG
CCGATGCTGC CGGTCGCGTC GAACCCGGCG CTGACGCGCC AGGGCTTCAA GAACATCTTC
CGGATCGGCG CGAGCGACGA ACAGCTCGGC GGCACGATGG CGACCTTCGC CGCGAAGACG
CTGAACGCGA AGACCGCAGT GGTCATCGAC GATCGCACCG CGTACGGGCA GGGTGTCGCC
GAGCAGTTCG CGAACGTCGC GAAGGCCAAC GGGATCAAGA TCGTCGACCA GGAGTACACG
AGCTCGTCGG CGACCGATTT CCTCGGCATT CTCACCAAGA TCAAGGCCAG CAATCCCGAC
GTGATCTTCT TCGGCGGCTA TGCGGCGCAG GGCGCGCCGA TGGCGAAGCA GATGAAGCAG
CGCGGCCTGC GCGCGAAGCT GCTCGGCGGC GACGGCATCT GCTCGGCCGA CATGGGCAAG
GTCGCGGGCG AGGCCGCGTC GATCGTCTAT TGCGCGCAGG GCGGCGTCGC GCTCGAGAAA
ACCTCGGCCG GCCGCGCATT CCTGAAGAAG TACCACGACA CCTATCACAC GGAGACGCAG
GTCTACGGCG TCAACTACTA CGACGGCATG AAGCTGCTCG CCGATGCGAT GGTCAAGGCC
GGCACGACCA CCGACAAGGC GAAGCTGATC GCGCAACTGG CGAAATCGAA CTACGCGGGT
GTCGCGGGCA CCTATTCGTT CGACGAACAC GGCGACCTGA AGGGCGCGCC GACCACCGTC
TACGTGATCC GCAACGGGCT GCCCGAACCG TACGCGAAGT AA
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| Protein sequence | MRYLITALSV AVAAGALTSA HAQEVVTIGH SAPLTGPQAA NGKDNENGAR LAVDELNKAG
VKVAGKTVTF KLVSDDDQAD PKAGVQVAQS LVDKGVVAVL GPYNSGVAIP ASRVYANAGV
PMLPVASNPA LTRQGFKNIF RIGASDEQLG GTMATFAAKT LNAKTAVVID DRTAYGQGVA
EQFANVAKAN GIKIVDQEYT SSSATDFLGI LTKIKASNPD VIFFGGYAAQ GAPMAKQMKQ
RGLRAKLLGG DGICSADMGK VAGEAASIVY CAQGGVALEK TSAGRAFLKK YHDTYHTETQ
VYGVNYYDGM KLLADAMVKA GTTTDKAKLI AQLAKSNYAG VAGTYSFDEH GDLKGAPTTV
YVIRNGLPEP YAK
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