| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3748 |
|---|
| Symbol | |
|---|
| ID | 4312644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 609003 |
|---|
| End bp | 610331 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638151590 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_775636 |
|---|
| Protein GI | 115358498 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.355731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTC AACACGCCCA GATCCTGCCT TCCGCGACCG GCGACGCAAG CGCGTCGCTG
AACCGGCTGC TGTTCCGCAA GCTCATGCCG CTGCTGATCG CCGCCTACGT GATCAGCTTC
CTCGACCGCA CCAACATCGC GTTCGCGAAG CACTCGATGG GCGTCGATCT CGGCATTTCA
TCCGCGGCCT ACGGGCTCGG CGCCGGCCTG TTCTTCCTGA CCTACGCGCT GTTCGAGATC
CCGAGCAACC TGATCATGCA TCGCGTCGGC GCGCGCTTCT GGATCACGCG GATCATGATC
ACGTGGGGCG CGTTGTCGGT CGCGATGGCG TTCGTCAGCG GCCCGACGTC GTTCTACGTG
ATGCGCCTGC TGCTCGGCGC CGCCGAAGCC GGACTGTTTC CGGGCGTGAT GCTGTACCTC
ACGTACTGGT TCGGTCGCGA GCAGCGGGCG CGGGCAACCG GCTACTTCCT GCTCGGCGTG
TGCATCGCGA ACATCGTCGG CGGGCCGCTG GCCGGCGCGC TGATCGAACT CGACGGCACG
CTCGGCTTCC ACGGCTGGCA ATGGCTGTTC GTCGTCGAAG GGATTCCGGC GATCCTGCTC
GCCTTCGTCG TGTGGACGCG CCTGCCGGAC CGTCCGAGCC GCGCGCCGTG GCTCGCCCCC
GAAACCGGCC GTGCACTCGA ACGCGCGCTC GCAGCCGAAC AGGATGCCGG GGTCGCCGCC
CACGGCGGCC ACCGCTTCGG CGCCGCGCTG CGCGATCCGC AGATCTGGCT CGCGATCTTC
GTGTACTTCT GCCACCAGTT GACGATCTAT ACGGTGATCT TCTTCCTGCC GGGCATCATC
GGCGCATCGG GGCACTTTTC GCCGTTCGCG GTCGGGTTGC TGACCGCGTT GCCCTGGCTC
GCCGCCGCAC TCGGCGCCGC CACCCTGCCG CGCTTCGCGC GCGAGTCGCA TCATGCGCGC
CGGATCCTGT GCGGCGGCCT CATCGTGATG GCGGCCGGAA TGGTGGGCGC CGCCAACGCG
TCGCCGGTGG CCGGCCTCGC TTGCGTATGC ATCGCCGCGT CGATGTTCTT CGTCGTGCAG
TCGATCGTGT TCACGTTTCC TGCGTCGCGA CTCGCCGGCA GCGCGCTGGC CGGCGGTCTC
GGTCTCGTGA ACACATGCGG GCTGCTCGGC GGCTTCGTCG GCCCGACCGT CGTCGGCGCG
ATCGAACAGG CGACCGGGAA TGCGAAGAAC GGACTGACGC TGCTTACCGC AGCGCTCGTC
GCCGCCGCGT TCGCGAGTCT CGCGCTGCGC CACGGGCACG AGCGGCCCGC TGTGCGATCG
CAAGGCTGA
|
|---|
| Protein sequence | MSTQHAQILP SATGDASASL NRLLFRKLMP LLIAAYVISF LDRTNIAFAK HSMGVDLGIS
SAAYGLGAGL FFLTYALFEI PSNLIMHRVG ARFWITRIMI TWGALSVAMA FVSGPTSFYV
MRLLLGAAEA GLFPGVMLYL TYWFGREQRA RATGYFLLGV CIANIVGGPL AGALIELDGT
LGFHGWQWLF VVEGIPAILL AFVVWTRLPD RPSRAPWLAP ETGRALERAL AAEQDAGVAA
HGGHRFGAAL RDPQIWLAIF VYFCHQLTIY TVIFFLPGII GASGHFSPFA VGLLTALPWL
AAALGAATLP RFARESHHAR RILCGGLIVM AAGMVGAANA SPVAGLACVC IAASMFFVVQ
SIVFTFPASR LAGSALAGGL GLVNTCGLLG GFVGPTVVGA IEQATGNAKN GLTLLTAALV
AAAFASLALR HGHERPAVRS QG
|
|---|
| |