| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3747 |
|---|
| Symbol | |
|---|
| ID | 4312643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 607586 |
|---|
| End bp | 608938 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638151589 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_775635 |
|---|
| Protein GI | 115358497 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2031] Short chain fatty acids transporter |
|---|
| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.243526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTAT CAGGAAACGA GGAGCTCAAG TTGGTCCAAC GCATTTCCCG CTTTTTCACG
CAGGTGGTCC ACCGCGTGCT GCCCGACCCG TTGATTTTCG CGATCCTGCT GACGATCGTC
ACGTTCGCGC TCGCCTTCGG TCTCACGCCG ACCACGCCGG TGCAACTCAC GACGATGTGG
GGTTCAGGCT TCTGGAACCT GCTCGCGTTT TCGATGCAGA TGGTGATGAT CCTCGTCACC
GGCCACGCGC TCGCGAGTTC GCCGCCGGTG CGCCGCCTGC TCGTTGCGCT CGCAAGCACC
GCGCGCACGC CGGGGCAGGG CGTGATGCTC GTCGCGTTCG TCGGCGCGCT CGCCTGCGCG
ATCAACTGGG GCTTCGGCCT CGTGCTCGGC GCGATGCTTG CGCGCGAAGT CGCGCGCCGC
GTCGCCGGCA GCGACTACCG GCTGCTCGTC GCATCCGCGT ACATGGGTTT CCTGAGCTGG
CACGGTGGGC TGTCGGGTTC GGTCCCGCTC GTCGCCGCGA CGAAGGGCAA TCCGATGGAA
AAGACCATCG GGCTGATTCC CGTGTCGGAC ACGATCTTCA CCGGCTACAA CGCGTTCATC
ACGATCGGGC TGATCGTGAT GCTGCCGTTT CTCGCGCGGA TGATGATGCC GAAGCCGGGC
GACGTCGTCA GCGTCGATCC GGCGCTGCTC GCGGAACCGC CGAGCGTCGA GCGCCAGCTC
GGGCCCGACG CGACGTTCGC GGAACGGATG GAAGAGAGCC GCGCGCTGTC GGTCGTCGTT
GCGGCGCTGT GCGCGGCGTT CCTCGTGCTG CGTTTCATGC AGAAGGGCTT CGCGCTCGAC
ATCGACACCG TGAACCTCGC GTTCCTCGCG GCCGGCATCC TGCTGCACCG TACGCCGATG
GCCTATGCGC GCGCGGTGGC CGGCGCGGCG CGCGGCGCAT CGGGGATCAT GATCCAGTTT
CCCTTTTACG CGGGCATCCA GGCGCTGATG GATCACTCGG GGCTCGCGGG CGTGATCACG
AAGTGGTTCG TCGATATCGC GAACGTGCAC ACGTTCCCGC TGCTCGCGTT CCTCAGTTCG
GCCGTGATCA ATTTCGCGGT GCCGTCGGGC GGCGGCCACT GGGTCGTGCA GGGCCCGTTT
GTGATGCCGG CCGCGCAGGC GCTCGGTGCC GATCTCGGCA AGGCCGCGAT GGCGATCGCC
TACGGCGAGG CGTGGACCAA CATGGCGCAG CCGTTCTGGG CGCTGCCCGC CCTCGCGATC
GCCGGGCTCG GCGTGCGCGA CATCATGGGG TACTGCGTGA CGACGCTGTT GTTCTCGGGC
GTGGTGTTCG TCGCAGGGAT GTATCTGTTC TGA
|
|---|
| Protein sequence | MSVSGNEELK LVQRISRFFT QVVHRVLPDP LIFAILLTIV TFALAFGLTP TTPVQLTTMW
GSGFWNLLAF SMQMVMILVT GHALASSPPV RRLLVALAST ARTPGQGVML VAFVGALACA
INWGFGLVLG AMLAREVARR VAGSDYRLLV ASAYMGFLSW HGGLSGSVPL VAATKGNPME
KTIGLIPVSD TIFTGYNAFI TIGLIVMLPF LARMMMPKPG DVVSVDPALL AEPPSVERQL
GPDATFAERM EESRALSVVV AALCAAFLVL RFMQKGFALD IDTVNLAFLA AGILLHRTPM
AYARAVAGAA RGASGIMIQF PFYAGIQALM DHSGLAGVIT KWFVDIANVH TFPLLAFLSS
AVINFAVPSG GGHWVVQGPF VMPAAQALGA DLGKAAMAIA YGEAWTNMAQ PFWALPALAI
AGLGVRDIMG YCVTTLLFSG VVFVAGMYLF
|
|---|
| |