Gene Bamb_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3745 
Symbol 
ID4312641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp604634 
End bp605875 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content67% 
IMG OID638151587 
ProductN-isopropylammelide isopropylaminohydrolase 
Protein accessionYP_775633 
Protein GI115358495 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCT TCAATGCACG CCTGCGCGGT CGCGACGGGC TCTTCACGAT CGGTATCGAC 
GGCGACAGGA TCGCGCGGAT CGACGCGCAA ACCGCGCCGG TCGTGCCCGC CGGCGCCGAC
GATATCGACG CCGGCGGCCG TGTCGCGATC CCGCCGCTGG TCGAGCCGCA TATCCATCTC
GATGCGGTGC TCACGGCCGG CGAGCCGGCC TGGAACATGA GCGGCACGCT GTTCGAGGGG
ATCGAGCGCT GGTCCGAGCG CAAGGCGACG ATCACGCACG AGGACACCAA GACGCGCGCG
CATGCGGCCA TCGGCATGCT GCGCGATCAC GGCATCCAGC ACGTGCGCAC CCACGTCGAC
GTCACCGATC CGACGCTCGC CGCGCTGAAG GCGATGCTCG AAGTGAAGGA CGAGGCGCGC
GGGCTGATCG ACCTGCAGAT CGTCGCGTTT CCGCAGGAAG GCATCGAGTC GTTCGACGGC
GGCCGCGCGC TGATGGAGCA GGCGATCGAT CTCGGCGCGG ACGTCGTCGG CGGGATTCCG
CATTTCGAGA ACACGCGCGA GCAGGGCGTC AGCTCGATCC GCTTCCTGAT GGAGCTGGCC
GAGCGCACCG GCTGCCTCGT CGACGTGCAC TGCGACGAGA CCGACGATCC GCATTCGCGC
TTTCTGGAAG TGCTCGCGGA AGAAGCGCGC GTGCGCGGCA TGGGCGCGCG CGTGACGGCG
AGCCACACCA CCGCGATGGG CTCGTACGAC AACGCGTACT GCTCGAAGCT GTTCCGGCTG
CTCAAGCGTG CCGGGCTGAA CTTCGTGTCG TGCCCGACGG AGAGCATCCA CCTGCAGGGG
CGTTTCGACA CGTTTCCGAA GCGGCGCGGC GTCACGCGCG TCGCGGAGCT AGATCGTGCG
GGTCTGAACG TGTGCTTCGG GCAGGATTCG ATCAAGGATC CGTGGTATCC GCTCGGCAAC
GGCAATATCC TGCGCGTGCT CGACGCCGGC CTCCATATTT GCCACATGAT GGGCTACGAG
GACCTGCAGC GCTGCCTCGA CTTCGTGACC GATCACAGCG CGACGACGAT GCATCTCGGC
GACGGTTACG GGATTGCGGT CGGGCGGCCG GCGAACCTGG TCGTGCTCGA CGCGGACAGC
GACTACGAAG CGGTGCGCAG GCAGGCGAAG GCCACGCTGT CGATTCGCCT CGGGAAGGTG
ATCATGCGGC GGGAGCCGGA GCGCGTCACG TATCCGGAGT GA
 
Protein sequence
MNLFNARLRG RDGLFTIGID GDRIARIDAQ TAPVVPAGAD DIDAGGRVAI PPLVEPHIHL 
DAVLTAGEPA WNMSGTLFEG IERWSERKAT ITHEDTKTRA HAAIGMLRDH GIQHVRTHVD
VTDPTLAALK AMLEVKDEAR GLIDLQIVAF PQEGIESFDG GRALMEQAID LGADVVGGIP
HFENTREQGV SSIRFLMELA ERTGCLVDVH CDETDDPHSR FLEVLAEEAR VRGMGARVTA
SHTTAMGSYD NAYCSKLFRL LKRAGLNFVS CPTESIHLQG RFDTFPKRRG VTRVAELDRA
GLNVCFGQDS IKDPWYPLGN GNILRVLDAG LHICHMMGYE DLQRCLDFVT DHSATTMHLG
DGYGIAVGRP ANLVVLDADS DYEAVRRQAK ATLSIRLGKV IMRREPERVT YPE