Gene Bamb_3735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3735 
Symbol 
ID4312631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp593356 
End bp594156 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID638151577 
ProductLuxR family transcriptional regulator 
Protein accessionYP_775623 
Protein GI115358485 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGAC TCTTCTCCGA AATCGCGATG CACCAGGCGC TCGGCCGCGC AATCGATCAT 
CTCGGCCAGC CGCGCTTCTG GCGGTTCCTG GTGCTGCTGC TCAACGAAAT GGCGCCGTTC
GACAACGCGC TTGCGACGGC GATCGGCCGC GACGGCGTGC CGCTCGTGCT CGACGAATAC
GACACGGGCG GCACCGACAG CGCGTCGCCG GTGCCGCTTT ACCTCAACGG GTTATATCTG
CTCGATCCGT TCCTGCAGGC CGCGCACGAC GGGCTCGCCG ACGGCTGCTA CCGACTCGAG
GAAGTCGCGC CCGACCTGTT CCGGCAGAGC GAGTATTTCC TGAGCTACTT CCGCGATGCG
GTCGGTGACG ACGAAATCCA GATCCTGCTG CGGCCGAACC CCGACCTGCT GCTGTCGTTG
TCGCTCGGCG CGGCCACGCG CTTCGACGTC GAGCCGCTCG GCAAGCTGAC GGCCGCGATG
CCGTGGGTGC TCGCGGCGAT CCGTCAGCAC TGGCGGCTGG TGGGCGATGC CGCGCGCGCG
ACGCCCGACG ACGATCTCGG CGCGCGCGTC GAGCAGGCGC TCGCGCGCTT CGGCGCGGGC
GTGCTGACGG ATCGCGAGAT GTCGATCGCG CGAATGGTGC TGCGCGGCAA TTCGTCGAAG
GCGATCGCGG AGCGGCTCGC GATTTCACCG GAGACGGTGA AGGTGCATCG GCGGCATCTC
TACGCGAAGC TCGGGATCTC GTCCCAGCCG GAGCTGTTCT CGCGGTTCAT TCAGGCGCTG
GGAGAGCATG CGGCGGGGTA A
 
Protein sequence
MDRLFSEIAM HQALGRAIDH LGQPRFWRFL VLLLNEMAPF DNALATAIGR DGVPLVLDEY 
DTGGTDSASP VPLYLNGLYL LDPFLQAAHD GLADGCYRLE EVAPDLFRQS EYFLSYFRDA
VGDDEIQILL RPNPDLLLSL SLGAATRFDV EPLGKLTAAM PWVLAAIRQH WRLVGDAARA
TPDDDLGARV EQALARFGAG VLTDREMSIA RMVLRGNSSK AIAERLAISP ETVKVHRRHL
YAKLGISSQP ELFSRFIQAL GEHAAG