Gene Bamb_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3729 
Symbol 
ID4312625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp586911 
End bp588269 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content68% 
IMG OID638151571 
Productbeta alanine--pyruvate transaminase 
Protein accessionYP_775617 
Protein GI115358479 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA CGATCACCAC CCGCCAGCAG GACGAGACCG ACCTCCGCAC CGACGCCGCG 
TGGCTCGACG CCCACTGGAT GCCGTTCACG GCGAACCGCC AGTTCAAGTC GGACCCGCGC
ATGATCGTGG CGGGCAAGGA CGCGTATTAC ACCGATGGCG AAGGCCGCAA GATCTTCGAC
GGCCTGTCGG GGCTGTGGTG CACGGGCCTA GGCCACGGCC GCGCGGAAAT CACGGAAGCC
GTGAGCCGCC AGGTCGCGCA GCTCGACTAC GCGCCGGCGT TCCAGTTCGG CCATCCGAAG
TCGTTCGAGC TCGCGAACAA GATCAAGGAC CTGACGCCGG CCGGCCTCGA CTACGTGTTC
TTCACCGGCT CGGGCTCGGA AGCAGCCGAC ACGTCGCTGA AGATGGCCCG CGCGTACTGG
CGTGCGAAGG GCAAGGGCAC GAAGACGCGC CTGATCGGCC GCGAGAAGGG CTATCACGGC
GTGAACTACG GCGGCATCTC GGTCGGCGGG ATCGGGCCGA ACCGCAAGCT GTTCGGTCAG
GGGATCGACG CCGATTTCCT GCCGCACACG CAACTCGCCG AAAACAAGTT CTCGCGCGGG
ATGCCGGAGA ACGGCGCCGA CCTCGCCGAC CGCCTGCTCG ACCTGATCGC GCTGCACGAC
GCATCGAACA TCGCGGCCGT GATCGTCGAG CCGTTCTCGG GTTCGGCGGG CGTGGTGGTG
CCGCCGAAGG GCTATCTGAA GCGCCTGCGC GACATCTGTA CCGCGCACGA CATCCTGCTG
ATCTTCGACG AAGTCATCAC GGGCTTCGGC CGTGCCGGCG CGATGACGGG CGCCGACGCG
TTCGGCGTGA CGCCGGACAT CATGAACTTC GCGAAACAGG TGACGAACGG CGTGCAGCCG
CTCGGCGGGG TGATCGCGAC GAAGGAAATC TACGACACGT TCATGGCCGT GGGCGGCCCC
GAGTACATGC TCGAGTTCCC GCACGGCTAC ACGTACTCGG CGCACCCGGT CGCCTGCGCG
GCCGGCGTCG CGGCGCTCGA CCTGCTGGTG AAAGAAGACG CGGTGGCCCG CGTGCGCGAT
CTCGCGCCGC ATTTCGAGGC GGCCGTGCAC GGGCTGAAGG GCCAGCGCCA TATCACGGAC
ATCCGCAACT ACGGGCTGGC GGCCGGCCTG ACGATCGCGG CGCTGCCGGG CGAGCCGGCA
CGGCGCCCGT ACGAGATCGC GATGCGCTGC TGGGCGAAGG GCTTCTACGT GCGCTACGGC
GGCGACACGA TCCAGCTCGC GCCGCCGTTC ATCTCGGAGA AGCGCGAGAT CGACAACCTC
GTTAACGCGC TGTCCGACGC GCTGAACGAA GTGGACTGA
 
Protein sequence
MTNTITTRQQ DETDLRTDAA WLDAHWMPFT ANRQFKSDPR MIVAGKDAYY TDGEGRKIFD 
GLSGLWCTGL GHGRAEITEA VSRQVAQLDY APAFQFGHPK SFELANKIKD LTPAGLDYVF
FTGSGSEAAD TSLKMARAYW RAKGKGTKTR LIGREKGYHG VNYGGISVGG IGPNRKLFGQ
GIDADFLPHT QLAENKFSRG MPENGADLAD RLLDLIALHD ASNIAAVIVE PFSGSAGVVV
PPKGYLKRLR DICTAHDILL IFDEVITGFG RAGAMTGADA FGVTPDIMNF AKQVTNGVQP
LGGVIATKEI YDTFMAVGGP EYMLEFPHGY TYSAHPVACA AGVAALDLLV KEDAVARVRD
LAPHFEAAVH GLKGQRHITD IRNYGLAAGL TIAALPGEPA RRPYEIAMRC WAKGFYVRYG
GDTIQLAPPF ISEKREIDNL VNALSDALNE VD