| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3721 |
|---|
| Symbol | |
|---|
| ID | 4312617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 578607 |
|---|
| End bp | 579626 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638151563 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_775609 |
|---|
| Protein GI | 115358471 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.383554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTCG ATGATCCACT CACTCCCCTC AACACATGGC TCGAAGCCAC GGAACGCAAC
ATGGCCAAAG CATTCGCATC GCAAGCCGAT CTGGAAGTGA AGAAGATCAC CTGGACGCAG
CTGTCCGAGA ACGCGTACGC GTATACCGCC GAAGGCGACC CGAACTCGGG CGTGATCGTC
GGTGACGACA GCGTGCTGAT CGTCGATACG ACCGCGACGC CCGCGATGGC GCAGGACCTG
ATCGCGAAGA TCCGCAGCGT GACCGACAAG CCGATCAAGC ACGTCGTGCT GTCGCATTAC
CACGCGGTGC GCGTGCTCGG TGCGTCCGCG TATTTCGCCG AAGGCGCGCA GCACGTGATC
GCGAGCCGCG GCACCTATGA AATGATCGTC GAGCGCGGCG AGGCCGACAT GAAGTCGGAG
ATCGAGCGCT TCCCGCGCCT GTTCGCGGGC GTCGAGACGG TGCCGGGCCT GACCTGGCCG
ACGCTCGTGT TCGAGCGCGA GATCACGCTG TTCCTCGGCA AGCTCGAAGT GAAGATCATG
CACGTCGGCT CGGGCCACAC GAAGGGCGAC ACGATCGTCT GGCTGCCGTC GCAGAAGGTG
CTGTTCTCCG GCGATCTGGT CGAATACGAC GCGGCCTGCT ATTGCGGCGA CGCGCAGCTC
GAACAGTGGC CGACCACGCT CGAGGCGCTG CGCGCGCTCG GCGCGGAAAA GCTCGTGCCG
GGCCGCGGCC CCGCGCTGCT GACTCCGGCC GATGTGAACA AGGGGCTCGA CTATACGAAG
GACTTCGTGA CGACGCTGCT CGCGCAGGGC CGCAAGGCCG TCGAGCGCAA GCTCGACCTG
AAGGCGTCGA TGGCGCTCAC GCGCGAAGCG ATGGATCCGA AGTTCGGCAA CGTGTTCATC
TACGAGCACT GTCTGCCGTT CGACGTGTCG CGCGCGTTCG ACGAGGCGAG CGGCATCACG
CATCCGCGCA TCTGGACCGC GCAGCGCGAC AAGGAAATGT GGGACGCGCT GCAGGACTGA
|
|---|
| Protein sequence | MQVDDPLTPL NTWLEATERN MAKAFASQAD LEVKKITWTQ LSENAYAYTA EGDPNSGVIV
GDDSVLIVDT TATPAMAQDL IAKIRSVTDK PIKHVVLSHY HAVRVLGASA YFAEGAQHVI
ASRGTYEMIV ERGEADMKSE IERFPRLFAG VETVPGLTWP TLVFEREITL FLGKLEVKIM
HVGSGHTKGD TIVWLPSQKV LFSGDLVEYD AACYCGDAQL EQWPTTLEAL RALGAEKLVP
GRGPALLTPA DVNKGLDYTK DFVTTLLAQG RKAVERKLDL KASMALTREA MDPKFGNVFI
YEHCLPFDVS RAFDEASGIT HPRIWTAQRD KEMWDALQD
|
|---|
| |