Gene Bamb_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3718 
Symbol 
ID4312614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp575621 
End bp576103 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID638151560 
ProductAsnC family transcriptional regulator 
Protein accessionYP_775606 
Protein GI115358468 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.531548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCC GCGAACGCAC GCCGAAAACC CTCGACAACC AGGACCGCAA GATCCTCGGT 
GCACTGCAAA AAAATGCGCG TCTGTCGAAC GCCGAACTGG CCGAACAGAT CGGCATGTCG
ACCACCGCGT GCTGGAACCG CACGCGGCAG CTCGAACTCG ACGGCTACAT CGACGGCTAT
GTCGCGCTGG TCAACCAGCG CATGCTCGGC TATGCGGACA TCGTGATCCT CGAAGTCACG
CTCGATCGCC ACGAAGACGA CGCGCTCGCG CGTTTCGGCG CCGAACTCGC GGCGCTGCCC
GAAGTGCTCG AGGCCTACCT GGTGTCGGGC GAATACGACT ACTGGATCAA GGTCGCGGTG
GACGGAACGG CCGGCTACGA GCGCTTCCTG CGCGAGAAGC TGTACCGGAT TTCGAGCATT
CGCCACAGCC GCTCGATGTT CGCGCTGCGG TGCATGAAGG ACGTGCCGTC GATTCAGGTG
TGA
 
Protein sequence
MATRERTPKT LDNQDRKILG ALQKNARLSN AELAEQIGMS TTACWNRTRQ LELDGYIDGY 
VALVNQRMLG YADIVILEVT LDRHEDDALA RFGAELAALP EVLEAYLVSG EYDYWIKVAV
DGTAGYERFL REKLYRISSI RHSRSMFALR CMKDVPSIQV