| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3709 |
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| Symbol | |
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| ID | 4312605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 561918 |
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| End bp | 563420 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638151551 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_775597 |
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| Protein GI | 115358459 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCG GCCTGCGCCC GACGGCCGCC GTGGCCGCCG TGACCGCTGT CGCGCTCGCG
GCGCTCGCCG GTTGCACGGT CGGCCCCGAC TACCGGCGCC CTGCCGTCGA CACGCCGGCC
GCGTGGCGGC TCGACCCGGC CGATGCGTAC TGGCACCCGG CCGCGCCGGC CCGTGCGCCG
CTCGATCCGG CGTGGTGGAC CGCGTTCGGC GACGCGCAGC TCGACGCGCT GGAAGCCGAC
GCGCTGCGCA ACAACCAGAG CCTGAAGGCG GTCGCCGCGC GCTACGACCA GGCGAAGGCC
ACGCTCGCGT CGGTCGCGTC CGCGCAGTAT CCGGCCGTCG GGCTGAACGC GAGCGGCCAG
CGCTTCAAGA TCTCCGCCGA TCGGCCGCAA ACCAATTACG CGACGAAAAG CATGTCGACC
GTGCAGAACG AGATCCAGGT CGGCGCGAGC GTCAGCTACG AACTCGACCT GTTCGGCCGC
GTGCGGCGCA GCGTCGAATC CGCGCAGGCC GGCTCCGAGC AGGCGCGCGA CGATTTCGCG
AACGCGCGCC TCGTGCTGAG CGCCGATCTC GCATCGAGCT ACTTCGCACT GCGCGAGCTC
GACACCGAGA TCGACGTCGT CAAGCGCTCG ATCGACCTGC AGCAGAAGGC GCTCGACTAC
GTGAGCGCGC GCCACGAGCT CGGCGCGGTG TCCGGCCTCG ACCTGTTCCA GCAACGCTCG
CAGCTAGATG CGACGCGCAC GCAGGCGCAG TTGCTGATCC AGCAGCGCGC ACAGGTCGAG
ACGGCGATCG CGACGCTGGT CGGCACGCCG GCCCCGGCGT TCTCGCTGCC GCCGCGCGTG
GTGCCGATCA ACGCGCCCGC GCTGCCGACC GGGATGCCGA GCGACCTGCT GCAGCGGCGG
CCCGACGTCG CGTCGGCCGA GCGCGCAATG GCCGCCGCGA ACGCGCAGAT CGGCGTCGCG
CGCGCCGCGT ACTTCCCGCG CATCGCGCTG TCGCCGGACA TCGGCTGGGA CGCGACGCGC
TTCTCCGGCC TGTTTACCGT GCCGGCGCTG CTGTGGTCGC TCGGCGCGTC GGTCAGCCAG
CCGCTGTTCG AAGGCGGCAA GCTGAAAGCC GGCGTCGATT TCGCGCAGGC CGGCTACGTG
GCCGCGCAGG CCAGTTACCG GCAGACCGTG CTCACCGCGT TCCAGGAGGT GCAGAATGCG
GTGACCGGCC TGTCGGTGCT GGCGCAGGCC GCGCAGCAGG CGTCGGCGGC CGTCGACGAC
GCGCGCAAGC TCGTGTCGCT CGCGCAGGAC CGCTATACGG GCGGCCTGAC GCCGTTCATC
GACGTGCTGA CGGCCCAGCA GCAGCTACTG ACGAGCGAGC GCCAGGCCGT GCAGATCCAG
GGCCAGCGCG CGGCGCTCGT CGTGTTTCTC GCGAAGGCGC TCGGCGGCGG CTGGGACGAC
GGCGCGACGC CCACCGATGT CGCGACAGTC AGCCCGCCGC CCGCCGCGGG CGTCGGCCCC
TAA
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| Protein sequence | MRAGLRPTAA VAAVTAVALA ALAGCTVGPD YRRPAVDTPA AWRLDPADAY WHPAAPARAP
LDPAWWTAFG DAQLDALEAD ALRNNQSLKA VAARYDQAKA TLASVASAQY PAVGLNASGQ
RFKISADRPQ TNYATKSMST VQNEIQVGAS VSYELDLFGR VRRSVESAQA GSEQARDDFA
NARLVLSADL ASSYFALREL DTEIDVVKRS IDLQQKALDY VSARHELGAV SGLDLFQQRS
QLDATRTQAQ LLIQQRAQVE TAIATLVGTP APAFSLPPRV VPINAPALPT GMPSDLLQRR
PDVASAERAM AAANAQIGVA RAAYFPRIAL SPDIGWDATR FSGLFTVPAL LWSLGASVSQ
PLFEGGKLKA GVDFAQAGYV AAQASYRQTV LTAFQEVQNA VTGLSVLAQA AQQASAAVDD
ARKLVSLAQD RYTGGLTPFI DVLTAQQQLL TSERQAVQIQ GQRAALVVFL AKALGGGWDD
GATPTDVATV SPPPAAGVGP
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