Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3708 |
Symbol | |
ID | 4312604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 561199 |
End bp | 561894 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151550 |
Product | two component heavy metal response transcriptional regulator |
Protein accession | YP_775596 |
Protein GI | 115358458 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGC TGATCGTCGA AGACGAACCG AAAGTCGTCG AATACCTGAA GAGCGGCCTG ACCGAGGAAG GCTGGGTCGT CGATACCGCG CTCGACGGCG AGGACGGCGC GTGGAAGGCC ATCGAATTCG ACTACGACGT GGTCGTGCTC GACGTGATGC TGCCGAAACT CGACGGCTTC GGCGTGCTGC GCGCGTTGCG CGCGCAGAAG CAGACGCCCG TGATCATGCT GACCGCGCGC GACCGCGTCG ACGACCGCGT GCGCGGGCTG CGCGGCGGCG CCGACGACTA CCTGACCAAG CCCTTCTCGT TCCTCGAGCT GATCGAGCGG CTGCGCGCGC TCACGCGCCG CGCGCGCGTG CAGGAATCGA CGCTGATCTC GATCGGCGAC CTGCGCGTCG ACCTGATCGG TCGCCGCGCG ACCCGCGACG GCACGCGCCT CGACCTCACC GCGCAGGAAT TCCAGTTGCT CGGCGTGCTC GCGCGGCGCA GCGGTGAGGT GCTGTCGAAA ACGACGATCG CCGAGCTCGT GTGGGACGTG AATTTCGACA GCAACGCGAA CGTCGTCGAG ACGGCGATCA AGCGCCTGCG CGCGAAACTC GACGGCCCGT TCGCGGAGAA ACTGCTGCAC ACGATCCGCG GCATGGGCTA CGTGCTTGAG GCGCGCGAGG AAGGCGACGC GGAGCGGCAC GCATGA
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Protein sequence | MKVLIVEDEP KVVEYLKSGL TEEGWVVDTA LDGEDGAWKA IEFDYDVVVL DVMLPKLDGF GVLRALRAQK QTPVIMLTAR DRVDDRVRGL RGGADDYLTK PFSFLELIER LRALTRRARV QESTLISIGD LRVDLIGRRA TRDGTRLDLT AQEFQLLGVL ARRSGEVLSK TTIAELVWDV NFDSNANVVE TAIKRLRAKL DGPFAEKLLH TIRGMGYVLE AREEGDAERH A
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