Gene Bamb_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3706 
Symbol 
ID4312602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp559053 
End bp559658 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content70% 
IMG OID638151548 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_775594 
Protein GI115358456 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC TGGTTTCGAT GGCCGCGTTC GCGCTGGCGT CGTCGATCAC ACCCGGTCCC 
GTCAACATCG TCGCGCTCAG CGCGGGAGCG CGCCACGGTC TCGGCGCAAG CCTGCGCTAT
GCGGCCGGCG CGACGCTCGG CTTCGTCGCG CTGTTCCTGC TGATCGGCCT CGGGCTGCAC
GCGGCGCTCG CGCGCTGGCC GATGCTGACC ACCGCCACGC AGTGGGCGGG AATCGCGTTC
CTGCTTTACC TTGCGCTGCG GCTTGCGCTC GACGACGGGC GGCTATCAGC CAACCCGGCC
GACCCGGACG CACCGAACGT CGCCGGCCCG TCGGCCGCGG CCGGTGCGGC GATGCAGTGG
CTCAATCCGA AGGCATGGCT CGCGTGCGTG GCCGCGATGG GCGCGTATGC GGCCGACGGC
GACCGCGCAC AGGTCTGGCA ATTCGCGGCG CTGTATCTGG TGATCTGCTT TGCGTCGATC
GCGTGCTGGG CGTATGCGGG CGCGTCGCTG CGGCATCGGC TCGCGAATGC GCGGCGGATG
CGGCTGTTCA ACCGCGCGAT GGCACTGCTG CTCGCGGGCA GCGCGCTTTA TCTGCTCGAT
ATCTAG
 
Protein sequence
MSMLVSMAAF ALASSITPGP VNIVALSAGA RHGLGASLRY AAGATLGFVA LFLLIGLGLH 
AALARWPMLT TATQWAGIAF LLYLALRLAL DDGRLSANPA DPDAPNVAGP SAAAGAAMQW
LNPKAWLACV AAMGAYAADG DRAQVWQFAA LYLVICFASI ACWAYAGASL RHRLANARRM
RLFNRAMALL LAGSALYLLD I