| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3697 |
|---|
| Symbol | |
|---|
| ID | 4312593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 548363 |
|---|
| End bp | 550081 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638151539 |
|---|
| Product | levanase |
|---|
| Protein accession | YP_775585 |
|---|
| Protein GI | 115358447 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCGTG TGCGCCCGCC CCTTTTTTTG TTTCGCAGAT CGCGCATGTC GCCGCCGTAC
GCGGCATGCG CCCTTCCTTC CCGCTTCGCA CAGCGGAGCA CGGGCCCCCG CATGAAATCG
ACGTTTTCCC GCTTTTCCTT CCGGTTCGCC TGCCTGCTCG CCTGTGCGGG CAGCATGCAC
GCAACCTGCG CCGCGCCGCC CGCGAGCGCG ACGCCGCAAT GGCGACCCGC CATCCATTAC
ACGCCGCAAC GCAACTGGAT GAACGATCCG AACGGCCTCG TCTACGAGAA CGGCCGCTAT
CACCTGTTCT ACCAGTACAA CCCGCTCGGC CACGACTGGG GCAACATGTC GTGGGGCCAC
GCGACCAGCA CCGACCTCGT CCACTGGCGC GAGCAGCCGG TCGCGCTGCA CGCGAATGCC
ACGGAGGAAA TCTTCTCCGG CTCGATCGTC GCCGACACGC ACAATACGTC CGGCCTCGGC
GCGCCGGGCG AGACGCCGCT CGTCGCGCTC TATACGAGCG TCTACAAGGC CGGCTCCGGT
CACGCGCCCG GCACGCAGGC GCAGTCGCTC GCATACAGCC TCGACCACGG CGCGACGTGG
CAGCCCTATG CGCGCAATCC GGTACTCACG CTCGATCCGG AATCGAAGCA GTTCCGCGAC
CCGAAGGTGT CGTGGTACGC GCCCGGGCGC TACTGGGTGA TGACGACGGT CGTCGCCGAT
GCACACGTCG TCAAGCTTTA CCGTTCCGAC GACCTGATCC ACTGGTCGTT CCTGAGCGAC
TTCACGCTGC CGGACGTGCC GCATGCCGGC GCGCTGTGGG AAATGCCCGA CCTCGTGCCG
CTGCCCGTCG ACGACGATCC GCGCCACATC AAGTGGGTGA TGATCGTCAA CGTCAACCCG
TGGTCGATCG CCGGCGGCTC GGGTGCGATG TATTTCGTCG GCAATTTCGA CGGCCGCACG
TTCGTCCCCG ACCGCGTCGC GCCGGCCGGC TCGGACCCCG CGCAATTCCG CTGGGTCGAT
CATGGCGCCG ATTTCTATGC GGCCGGCACC TTCTCGGGTG CGCCGGGCGC ACGCCCGGTC
GCGATCGCGT GGATGAGCAA CTGGGACTAC GCGGCGAAAG CGCCCACGGC ACCCTGGCGC
GGCGCGATGA CGCTGCCGCG CGAGTTCGCG CTGAAGACGA TCGGCGGCGA ACCCACGCTC
TTCGTGACGC CGGCCGCCGC GTTCGATGCG TGGGCCGACG GGCGGCCCGC CGTGCATGAA
GGCGATCTGA GCGTCGAATC CGCCACGCGC GCGTTGTCGG CCGCCACGCG CGGCGTCGTG
CAGCGCATCA CGGTGACGAT CGAGCCGCGG CGCGCGGCCC GCGCCGGGTT GATCGTCCGC
GGATCGGCGG ACGGCGCGAT CGGCACCCGG ATCGTGTACG ACACCGCGAA GCGCACGCTG
ACGCTCGACC GCTCCCGTTC CGGCGCGACG GATTTCACTG GAAACTTCAG CCGCGAGCAC
ATCGTCGATC TGCCGCTCGA GAACGGGCGA TTGCAGCTTG AAATCGTCGT CGATCGCGGT
TCGGTCGAAG TGTTCGCGAA CGGCGGTCGC GTGGCGCTCA CGGACCTGAT CTTTCCGCCC
CGCGAGGCGG ACCGCGTCGC AGTGTTCGCC GAGCATGGCA GCGCCACGTT CTCGGGGCTG
ACGGTGACGC AGCTCGATGC GGGTCACGCA TCGCGCTAG
|
|---|
| Protein sequence | MPRVRPPLFL FRRSRMSPPY AACALPSRFA QRSTGPRMKS TFSRFSFRFA CLLACAGSMH
ATCAAPPASA TPQWRPAIHY TPQRNWMNDP NGLVYENGRY HLFYQYNPLG HDWGNMSWGH
ATSTDLVHWR EQPVALHANA TEEIFSGSIV ADTHNTSGLG APGETPLVAL YTSVYKAGSG
HAPGTQAQSL AYSLDHGATW QPYARNPVLT LDPESKQFRD PKVSWYAPGR YWVMTTVVAD
AHVVKLYRSD DLIHWSFLSD FTLPDVPHAG ALWEMPDLVP LPVDDDPRHI KWVMIVNVNP
WSIAGGSGAM YFVGNFDGRT FVPDRVAPAG SDPAQFRWVD HGADFYAAGT FSGAPGARPV
AIAWMSNWDY AAKAPTAPWR GAMTLPREFA LKTIGGEPTL FVTPAAAFDA WADGRPAVHE
GDLSVESATR ALSAATRGVV QRITVTIEPR RAARAGLIVR GSADGAIGTR IVYDTAKRTL
TLDRSRSGAT DFTGNFSREH IVDLPLENGR LQLEIVVDRG SVEVFANGGR VALTDLIFPP
READRVAVFA EHGSATFSGL TVTQLDAGHA SR
|
|---|
| |