| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3696 |
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| Symbol | |
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| ID | 4312592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 547462 |
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| End bp | 548298 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151538 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_775584 |
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| Protein GI | 115358446 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0367097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCG CGCCCATCGC ACGGCACGGC CGCGGGCCGA GCGCATCCTG TGTTGACGGT
CAACTCACCG GTTCACAGGA GAACATCATG CAACGCTTCG AAGGAAAGAC GGTTCTGGTC
ACGGGCGGCA ACAGCGGCAT CGGCCTGGCG GCCGCACGGG CATTCGCGGC CGAAGGCGCG
CGCGTCGTCA TCACCGGCCG CGACGAGCAG ACGCTCGCCG CCGCACGCGA GACGCTCGGC
GACGGCGCGC TCGCGATCCG CAACGAGGCC GGCAGCGTCG CGTCGGCGCG GGCGCTGGCC
GACGCGCTCA CGGCGTCCGG CGTGCGGCTC GACGCGGTGT TCATCAATGC GGGCGTCGCG
AAACTCGCGC CGTTCGCGGA TAGCGACGAG GCGATGTGGG ACCTCGTGTT CAACACCAAC
GTGAAGGGCG CGTATTTCCA GATCCAGTCG CTCGTGCCGC TGCTGAACCG CGGCGCGTCG
ATCGTGATCA ACGGGTCGAT CAACGCGCAC ATCGGGATGC CGGGTTCGTC CGTGTATGCG
GCGAGCAAGG CAGCCGTCAA TTCGTTCGCG AAGACGCTGT CGACGGAATT GCTGCCGCAC
GGCGTGCGGG TGAACGTGGT GAGCCCCGGG CCGGTGCAGA CGCCGCTGTA CGGCAAGCTC
GGCCTCGATG CGGCAGCGCT CGACGAGACG GCCGACAAGA TCAGGGGCCT CGTCCCGATC
GGCCGCTTCG GCACGCCGGA CGAAATCGCG TCGACGGTGC TGCACCTGAG CGCGCCCGAG
TCCGCCTTCA TCGTCGGCGC GGAAATCATC GCGTCGGGCG GGATGGGCTT GCTCTGA
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| Protein sequence | MFAAPIARHG RGPSASCVDG QLTGSQENIM QRFEGKTVLV TGGNSGIGLA AARAFAAEGA
RVVITGRDEQ TLAAARETLG DGALAIRNEA GSVASARALA DALTASGVRL DAVFINAGVA
KLAPFADSDE AMWDLVFNTN VKGAYFQIQS LVPLLNRGAS IVINGSINAH IGMPGSSVYA
ASKAAVNSFA KTLSTELLPH GVRVNVVSPG PVQTPLYGKL GLDAAALDET ADKIRGLVPI
GRFGTPDEIA STVLHLSAPE SAFIVGAEII ASGGMGLL
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