| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3693 |
|---|
| Symbol | |
|---|
| ID | 4312589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 544244 |
|---|
| End bp | 544681 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638151535 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_775581 |
|---|
| Protein GI | 115358443 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.333462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCGC GCCTGAACTT CTATACCGCC AGCCCGAACG CGATCAAGGT GATGCGCAAT
GCCGAGGAAT TCATCGCGAA GAGTTCGATC GAGAAGCCGC TCGCCGAACT CGTCCGGCTG
CGCGCGTCGC AGATCAACGG CTGCGCGTTC TGCGTCGACA TGCACACCAC CGACGCGCGC
AAGGGCGGCG AGACCGACCG ACGCCTGGCG ACGGTGGTCG CCTGGCGCGA AACGCCGTTC
TTCACCGAGC GCGAACGCGC GGCGCTCGAA TGGACCGAAG CGCTGACGCT GGTGGCCGAC
AACCACGTGC CCGATTCCGT CTGGGAAGCC GTGAAGCCGC ACTTCAGCGA CACGGAACTG
TTCGACCTGT CGATGCTGAT CGCGACGATC AACACGTGGA ACCGCTTCGC GATCGCGTTC
CGCAAGATGC CCGAGTAA
|
|---|
| Protein sequence | MQPRLNFYTA SPNAIKVMRN AEEFIAKSSI EKPLAELVRL RASQINGCAF CVDMHTTDAR
KGGETDRRLA TVVAWRETPF FTERERAALE WTEALTLVAD NHVPDSVWEA VKPHFSDTEL
FDLSMLIATI NTWNRFAIAF RKMPE
|
|---|
| |