Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3692 |
Symbol | |
ID | 4312588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 543202 |
End bp | 543936 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638151534 |
Product | TetR family transcriptional regulator |
Protein accession | YP_775580 |
Protein GI | 115358442 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.674174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATTAA CTAACTCATC AATTAGCGTC GTCTGCATGA ACGCGAAATC CACCGTCGCC AGGCCGCGCG GGCGCCGCCC GTCGGTGGAA GACTTCGACC TGCGCGATCA CATGCTCGAC GTGGCGATCC AGCTGTTCGC CGAGCACGGC ATCGCCGCGA CGACGGTCGC GCAGATCGCC GCGGCCGCCG GCGTCACGTC GGCGATGGTC CACTACTACT TCACGAATCG CGAGCAACTG CTCGACGCGA TCGTCGAGGA GCGGCTCGCG CAGGTCATCG CGTTCGTGTG GCGGCCGACC GCGCCGCAGA TCGAAAACGA TCCGTTCGCG CTCGTCGCCG AGCTCGTCGA CCGGTTCTTC GACGTCACGC ATCGCATGCC GTGGCTGCCG TCGATCTGGC TGCGCGAGAT CGTCCACGAA GGCGGGCTGC TGCGCGAGCG GATGGTCCGC CGCATTCCGC TCGAGCATGT CGGGCGTTTT GCCGAACGCA TCCGCGCCGC GCAGCAGGCC GGCACGCTGA ACCCGTCACT CGAACCCGCC TTCCTGTTCC ATTCGATCAT CGCGCTCGTC ATGCTGCCGC TCGCGACCGC GAAGCTGTGG CAAAGCGCGC GCGGCCTGCC GCCGATCGAT CGCGACGTGC TGCATCGCCA CGTCCGCGCG CTGCTCGGCT CCGGCATGCA GCCGCCCGTC ACCGCACCGG ATGCGCACTC GCGCGCGCCA CGGAGGCCGT CGTGA
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Protein sequence | MKLTNSSISV VCMNAKSTVA RPRGRRPSVE DFDLRDHMLD VAIQLFAEHG IAATTVAQIA AAAGVTSAMV HYYFTNREQL LDAIVEERLA QVIAFVWRPT APQIENDPFA LVAELVDRFF DVTHRMPWLP SIWLREIVHE GGLLRERMVR RIPLEHVGRF AERIRAAQQA GTLNPSLEPA FLFHSIIALV MLPLATAKLW QSARGLPPID RDVLHRHVRA LLGSGMQPPV TAPDAHSRAP RRPS
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