| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3686 |
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| Symbol | |
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| ID | 4312582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 535692 |
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| End bp | 536756 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151528 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_775574 |
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| Protein GI | 115358436 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.481699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTC ATACCGATCC CGCCTACCTG CTCGGCGACC TGCTGAAGAA CGTTTCCCGC
TCCTTTTACC TGACGCTGCG CGTGCTGCCC GACGGCATGC GCGAGCCGGT CGGCCTGGCC
TATCTGCTCG CGCGCGCGGC CGACACGATC GCCGACACGG CGCTCGTCGC GCCCGAGCGT
CGCGCGGCGC TGCTGACCGA CCTGCGCGAC GAGATCGAGC GGCTCGGCGA CGGCGCGGCG
CTGTCGCGCG CGCTCGAGGA TGTCACGCGG ATGCAGACGG ATTCGCACGA ACACATGCTG
CTCGCGTCGA TGAAGCCGAT GCTTGCGTTG CTGCGCGCGC AGCCGGACGC GGACCGCGCA
TCGATCCGCA AGGTCGTCGC GACGCTGACG TCGGGGATGG AGTTCGACCT CCGCACGTTC
CCCGACGAGC AGTCGGGGCA GGTCGCGTCG CTGCCGAGCC GTGACGAACT CGATCGCTAC
ACGTATCTGG TCGCCGGCTG CGTCGGTGAA TTCTGGACCG ACATGACCGG CGCGCACACG
CGGGCCGCGC GCGGCTGGGA TTTCGCGGAC ATGCGCGAGA AGGGCATCCG TTTCGGCAAG
GCGCTGCAGA TGACCAACAT CCTGCGCGAC TGCGCGAAGG ACCTGCGGAT CGGCCGCTGC
TACCTGCCGG ACGACGTGCT GGCCGAGCAT CGCATCGGCG TCGCCGACCT GATGTCGCCC
GACGCGTCGG CGCGCGCGCG CGGCGTGCTG GTCGAGCTGT TGCGCGCGAC GCTCGCGCAG
TATCGCGACG CGTGCTTCTA TACGCAGGCG ATTCCGCGCC GCTTCGTGCG TCTGCGGCTC
GCGTGCCTGT GGCCGATCAT GATCGGCCTC GAAACGCTCG AACTGCTGGC CGGCCACGAC
GCGTGGCTCG ATCCGGCGCG GCCGGCGAAG GTGCCGCGCA AGCGCGTCTA CCGGATCATG
GCGTCGTCGC TCGCGCTCGT CGGTTCGAAC GCGGCGATCC GTGCGCGCAT CAACGCGCTG
GTCGACGCGG TGAACGCGCG GATCGCGGCC CCCGCGTCGC ATTGA
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| Protein sequence | MTTHTDPAYL LGDLLKNVSR SFYLTLRVLP DGMREPVGLA YLLARAADTI ADTALVAPER
RAALLTDLRD EIERLGDGAA LSRALEDVTR MQTDSHEHML LASMKPMLAL LRAQPDADRA
SIRKVVATLT SGMEFDLRTF PDEQSGQVAS LPSRDELDRY TYLVAGCVGE FWTDMTGAHT
RAARGWDFAD MREKGIRFGK ALQMTNILRD CAKDLRIGRC YLPDDVLAEH RIGVADLMSP
DASARARGVL VELLRATLAQ YRDACFYTQA IPRRFVRLRL ACLWPIMIGL ETLELLAGHD
AWLDPARPAK VPRKRVYRIM ASSLALVGSN AAIRARINAL VDAVNARIAA PASH
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