Gene Bamb_3685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3685 
Symbol 
ID4312581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp534188 
End bp535333 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID638151527 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_775573 
Protein GI115358435 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTCA TGCGCCCGAC CGCCCTGCGC TGCATCCCGT TCGCCTGTGC CGCCGCCCTG 
CTGCTTGCCG CCTGCGGCGG CGACGATATC TCGGCGTCCG ATCCCACGCA ACCGATCTCC
GTGAAGGTGC AGGTGGTCGG CCATCGCGGC GCGAGCGCGC TGCGGCCCGA GCACACGCTC
GCGTCGTACC GCAAGGCAAT CGAGGACGGT GCGGACGTGA TCGAGCCCGA CCTCGTCGCG
ACCCGCGACG GCGTCCTGGT CGCGCGCCAC GAAAACGAAA TCTCGGGCAC GACGAACGTG
TCGACGCTGC CGCAGTTCGC GAGCCGCAAG GCGACCAAGA CGATCGACGG TACGCAGCTG
ACCGGCTGGT TCACCGAGGA CTTCACGCTC GCGGAGCTGA AGACGCTGCG CGCCCGCGAG
CGCATTCCGC AGATCCGTCC GGCGAACACC GCGTACAACG ATCAGTTCGA GATCCCGACC
TTCGACGAAA TCGTCGCACT CGCGAAGCAG ATGGCCGCCC AGACCGGCCG CACGATCCAC
CTGTATCCGG AAACCAAGCA CCCGACCTAC TTCCAGTCGA TCGGCCTGCC GCTCGAGGAC
CGCCTCGTCG ATGCGCTGCT GAAGGATCCG TATACGGCGC GCACGGCGAC CGTCTACATC
CAGTCGTTCG AAGTCGCGAA CCTGAAGACG ATCCGCAACC GGATCAAGTC GAGCCAGCCG
AACTGGAAGC TCGTGCAGTT GATGGACGAA GCCGGCCAGC GTCCGTACGA CTTCGTGAAG
GCGAACGACA AGCGCACCTA TGGCGACCTG TCGACGCGCG ACGGAATGCG CGAGATCGCG
TCCTATGCGA ACGGCGTCGG GCCGTACAAG ACGTCGATCA TCGCGGTGGC CGCGGACGGC
ACGCTGCAGC AGCCGACGCC GTACGTGCGC TACGCGCACG AAGCCGGCCT CGTCGTGCAC
CCGTACACGT TCCGCCCGGA GAACAACTTC CTGCCCGCGT CGCTGAAGGA CGGCGGCACG
CCGGCCACGC GCAACACCGC GGGCTCGGTG CGCGAGATCC AGGCTTATCT GCGCGCGGGC
ATCGACGGCT TCTTCACCGA CGATCCGGCC GTGGGACGCA CGGCTGTTGA TACGTTCAAG
CGCTGA
 
Protein sequence
MLFMRPTALR CIPFACAAAL LLAACGGDDI SASDPTQPIS VKVQVVGHRG ASALRPEHTL 
ASYRKAIEDG ADVIEPDLVA TRDGVLVARH ENEISGTTNV STLPQFASRK ATKTIDGTQL
TGWFTEDFTL AELKTLRARE RIPQIRPANT AYNDQFEIPT FDEIVALAKQ MAAQTGRTIH
LYPETKHPTY FQSIGLPLED RLVDALLKDP YTARTATVYI QSFEVANLKT IRNRIKSSQP
NWKLVQLMDE AGQRPYDFVK ANDKRTYGDL STRDGMREIA SYANGVGPYK TSIIAVAADG
TLQQPTPYVR YAHEAGLVVH PYTFRPENNF LPASLKDGGT PATRNTAGSV REIQAYLRAG
IDGFFTDDPA VGRTAVDTFK R