Gene Bamb_3676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3676 
Symbol 
ID4312572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp524131 
End bp524931 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content72% 
IMG OID638151518 
ProductABC transporter related 
Protein accessionYP_775564 
Protein GI115358426 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.618015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGCG CCGCCGTTCT CGAACCCTCC GTTGTCACCG CGCCGCGCGG CGCGCGCATC 
GACATTCGCC GCGTGAGCCA TGCGTTCGAC GGCCCCGGCG GCCCGCTGCC GGTGCTCGAC
GACGTCACGC TGTCGGTCGC GGCCGGCGAA TTCGTTGCGC TGCTCGGCCC GAGCGGCTGC
GGGAAATCGA CGCTGCTGCG GCTCGTCGCG GGCCTCGACG CCGCGCGGCA CGGCACGATC
GCGCAGGACG GCGCGCCGAT CGAACGGCCC GATCCGTCGC GCATCGTCGT GTTCCAGGAT
CCGACGCTCT ACCCGTGGCG CCGGGTGCGC GCGAACGTCG CGCTCGGTCT CGAAGCGCGG
GGCGTGGCGC GCACCGCGCA GCATCGCGTC GACGATGCGC TCGCGCGCGT CGGGCTGCAG
GAATTCTCCA ACGTGTTTCC GCATCAGCTG TCGGGCGGGA TGGCGCAGCG CGTCGCGCTC
GCCCGCGCGC TCGTCAACGA TCCGCGCCTC CTGATCCTCG ACGAGCCGCT CGGCAAGCTC
GACTCGCTGA CGCGCTTGAC GATGCAGGCC GAGCTGACCG CGCTGTGGCA ACGCGACGGA
TTCTCCGCGC TGCTCGTCAC GCACGATGTC GAGGAAGCGC TGTTTCTCGC GCAACGCGTG
ATCGTGTTCG GGCCGCGTCC CGCACGCATC GTCGCGGAAC TGCGCGTCGA CCTGCCCTAT
CCGCGCCATC GCGGCGACCC GCGTCTCGCC GCGCTGCGCC ATGAGGCGCT GCGGCATCTC
GGTCTCGATG CGAGCTGGTA G
 
Protein sequence
MVSAAVLEPS VVTAPRGARI DIRRVSHAFD GPGGPLPVLD DVTLSVAAGE FVALLGPSGC 
GKSTLLRLVA GLDAARHGTI AQDGAPIERP DPSRIVVFQD PTLYPWRRVR ANVALGLEAR
GVARTAQHRV DDALARVGLQ EFSNVFPHQL SGGMAQRVAL ARALVNDPRL LILDEPLGKL
DSLTRLTMQA ELTALWQRDG FSALLVTHDV EEALFLAQRV IVFGPRPARI VAELRVDLPY
PRHRGDPRLA ALRHEALRHL GLDASW