Gene Bamb_3671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3671 
Symbol 
ID4312567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp519248 
End bp520216 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID638151513 
Productalcohol dehydrogenase 
Protein accessionYP_775559 
Protein GI115358421 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TTGTGATGAA CGGCATCGGC GGCCGCGACA TGCTTGAGCA GGTCGAGCGG 
ACCGCCCCGG TGGCGCGTAC GGGCGAGGCG CTGGTCGAGA TCGCCTTCGC GGGCGTCAAC
TTCATGGACA TCGGCGTGCG ACAGGGCATG GCCTGGACCG GGTGGCCCAA CCCGAAGATT
CTTGGCGTCG AAGGCGCGGG CCGGGTGCTG GCGGTCGGCG ACGACGTCGA GGGCATCGAA
CCCGGCCAGC GCGTCGCGTG GGTCTACGCG CCCGGCAGCT ATGCGGAGCA GATCGCGATC
CCCGCCACGT CGCTGGTGCC GGTTCCGGAC ACGATCGACG ATCGCACGGC CGCCGCCGTG
ATGATGCAGG GTCTCACCGC CAGCCATTTC GCGACCGACT TCTATCCCGT GCAGCCGGGC
GACGTCGCTT TCGTCCACGC GGCTGCCGGC GGCCTGGGCC TGCTGTTGAC GCAGATCATC
AAGCTGCGAG GCGGCCGGGT AATCGGGCGC GTCTCGTCCG AAGACAAGGT CGCCGCGGCC
ACGGAAGCGG GCGCGGATCA TGTGATCGTC GATACCGGCG GCCGGTTCGC CGCGAAGGCA
CTGCGCCTGA CCAACGGCGA AGGCGTGCAC GTCGTCTACG ACGGCTCCGG GCCGAAGACC
TTTCAGGGAT CGCTCGACGT GCTGCGCCGC TCGGGCACCT TCTGCTGGTA CGGTCCGGTG
CTCGGCGGGC CGGAGCCGAT CGACCTCATG AGCCTGCCGA GGAGCGTCAA GATCGGCTAT
GCGACCTTCT TCGATCATAT CGACACGCCC GAACTGCTTC GCGCGCACTC GGCGCGGCTG
TTCGACTGGA TCGCGGAAGG CCGGCTCAAG GTGCGGATCG GCGGCGAATA TCCGCTGGCG
GACGCGGCGC ACGCGCATGC CGACATGGAA AGCCGCAAGT CCATCGGCAA GCTGCTGCTG
AAGCCGTGA
 
Protein sequence
MKAIVMNGIG GRDMLEQVER TAPVARTGEA LVEIAFAGVN FMDIGVRQGM AWTGWPNPKI 
LGVEGAGRVL AVGDDVEGIE PGQRVAWVYA PGSYAEQIAI PATSLVPVPD TIDDRTAAAV
MMQGLTASHF ATDFYPVQPG DVAFVHAAAG GLGLLLTQII KLRGGRVIGR VSSEDKVAAA
TEAGADHVIV DTGGRFAAKA LRLTNGEGVH VVYDGSGPKT FQGSLDVLRR SGTFCWYGPV
LGGPEPIDLM SLPRSVKIGY ATFFDHIDTP ELLRAHSARL FDWIAEGRLK VRIGGEYPLA
DAAHAHADME SRKSIGKLLL KP