Gene Bamb_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3664 
Symbol 
ID4312560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp509819 
End bp510886 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content70% 
IMG OID638151506 
ProductABC transporter related 
Protein accessionYP_775552 
Protein GI115358414 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.530384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.484682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGC TCATCGTCGA CGACCTGCAT CTCAGCTACG GCGCCAACCC GATCCTCAAG 
GGCGTGTCGT TCGAACTGAA CGCCGGCGAA GTCGTGTGCC TGCTCGGCGC GTCGGGCAGC
GGCAAGACCA CGCTGCTGCG TGCGGTGGCC GGCCTCGAAC AGCCGTCCGA CGGGCGCATC
CAGCTCGACG ACCGCGTGTT CTTCGACGGC GCGCGGCGCG TCGATCTGCC CGTCGAACAG
CGTTCGCTCG GCCTCGTGTT CCAGTCGTAC GCGCTGTGGC CGCACCGCAC CGTCGCCGAC
AACGTCGGCT ACGGGCTCAA GCTGCGCCGT GTGGCGCCGG CCGAACAGAA GCGCCGCGTG
CAGGCCGCGC TCGACCAGCT CGGCCTCGGC CATCTCGCCG AACGCTTTCC GCACCAGTTG
TCGGGGGGCC AGCAGCAGCG TGTCGCGATC GCGCGTGCGC TCGTCTACAA CCCGCCGGTG
ATCCTGCTCG ACGAGCCGCT GTCGAACCTC GATGCGAAGC TTCGCGAGGA GGCGCGTGCA
TGGCTGCGCG AGCTGATCGT GTCGCTCGGG CTGTCGGCGC TCTGCGTGAC GCACGACCAG
ACCGAAGCGA TGGCGATGTC CGACCGCATC CTGCTGCTGC GCAACGGCCG CATCGAGCAG
GAAGGCACGC CGGCCGAGCT GTACGGCGCG CCGCGCTCGC TGTACACGGC CGAATTCATG
GGCAGCAACA ACCGCATCGA CGCACGCGTG GCGGCCGTCG ACGGCGAACG CGTGACGCTC
GCCGGCGACG GCTGGGAGCT GCAGGCGCTC GCCCGCGATA CGTTCACGCC GGGCCAGGAC
GCGCAGGCCG TGATTCGCCT CGAACGCGTA CAGGTCGCCG ACGGCCCGGG CGCGAACCGG
CTGCAGGCCG ACCTCGTCAC GTCGATGTAT CTCGGCGACC GCTGGGAATA CCTGTTCCAT
TGCGGCGAGA TGCGCCTGCG TGCGTTCGGC CACGTGCCGC GCGCGGCCGG CACGCACTGG
ATCGAATTCC CGGCCAACGA CTGCTGGGCG TTCGCGAAAG CGGGCTGA
 
Protein sequence
MDKLIVDDLH LSYGANPILK GVSFELNAGE VVCLLGASGS GKTTLLRAVA GLEQPSDGRI 
QLDDRVFFDG ARRVDLPVEQ RSLGLVFQSY ALWPHRTVAD NVGYGLKLRR VAPAEQKRRV
QAALDQLGLG HLAERFPHQL SGGQQQRVAI ARALVYNPPV ILLDEPLSNL DAKLREEARA
WLRELIVSLG LSALCVTHDQ TEAMAMSDRI LLLRNGRIEQ EGTPAELYGA PRSLYTAEFM
GSNNRIDARV AAVDGERVTL AGDGWELQAL ARDTFTPGQD AQAVIRLERV QVADGPGANR
LQADLVTSMY LGDRWEYLFH CGEMRLRAFG HVPRAAGTHW IEFPANDCWA FAKAG