Gene Bamb_3662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3662 
Symbol 
ID4312558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp507508 
End bp508473 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content71% 
IMG OID638151504 
Productalcohol dehydrogenase 
Protein accessionYP_775550 
Protein GI115358412 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.204482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.492492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG CAGTCGTGAC GGGCGCGGGC GAAAGCCCGG TCTATATGGA GTTCGAAGTA 
CCGCACGCGA GGCCGGGCCA CCGTGCGGTC GACATGACGG CGTCCGCGTT GAGCCGGCTC
GCGCAGGGGC GCGCGTCGGG CACGCATTAT TCGTCGGGAA GCGGCTATCC GTTCGTCGTC
GGCGTCGACG GCGTGGGCCG GCTCGACGAC GGGCAGCGCG TCTATATTTT CGGCGCCCCC
GCGCCGTTCG GCACGATGGC CGAGCGCACG ATCGTGCCCG ACGCCCAGTG CGTGCCGCTG
CCGGACGGGC TCGACGACAT CACGGCCGCG GCGATCGCGA TTCCCGGGAT GTCGTCGTGG
GCGGCGCTGA TCGAACGCGC GCGCTTCGTT ACGGGCGAGA CGGTGCTCGT CAACGGTGCG
ACCGGAACGT CGGGCCGGCT CGCGGTGCGG ATCGCCAGGC ATCTCGGCGC GGCGAAAGTG
ATTGCGACGG GCCGCAACGC GGTTGCGCTG GAGGCATTGC TGAGTGACGG CGCGGACGCC
GTCGTGTCGC TGCAGCAGGA CGATGCTGAT CTGGCGCGTG CGCTCGAACC GCATTTCCGC
GCGGGGGTGG ACGTCGTGCT GGACTATCTG TGGGGCACCA GTGCGCACGC GTTGCTGATC
ACGGCGGCGC GGTCGGCGCC CGATGGCCGG CGGCTGCGCT TCGTACAGAT CGGCTCGATC
GGCGGTGCGG ACGTGCTGTT GCCGGGGGCC GTGCTGCGGG CGAAGGCAAT CGAACTGATG
GGCAGCGGCC TCGGCAGCGT GTCGCCGGCG GGGTTGCTGG CGGCCGTGCG CGGCGTGTTC
GCCGCGGCCG GGCCGGCACG GCTGACGATC GACACGCGGG CGGTGCCGCT GTCGGCGGTC
GGCGAACACT GGAACGATAC GAACAGTCTC GTGCGCACGG TGTTCACGAT GCGCGACGGT
GCGTGA
 
Protein sequence
MKAAVVTGAG ESPVYMEFEV PHARPGHRAV DMTASALSRL AQGRASGTHY SSGSGYPFVV 
GVDGVGRLDD GQRVYIFGAP APFGTMAERT IVPDAQCVPL PDGLDDITAA AIAIPGMSSW
AALIERARFV TGETVLVNGA TGTSGRLAVR IARHLGAAKV IATGRNAVAL EALLSDGADA
VVSLQQDDAD LARALEPHFR AGVDVVLDYL WGTSAHALLI TAARSAPDGR RLRFVQIGSI
GGADVLLPGA VLRAKAIELM GSGLGSVSPA GLLAAVRGVF AAAGPARLTI DTRAVPLSAV
GEHWNDTNSL VRTVFTMRDG A