| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3642 |
|---|
| Symbol | |
|---|
| ID | 4312538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 484656 |
|---|
| End bp | 486434 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638151484 |
|---|
| Product | phosphotransferase domain-containing protein |
|---|
| Protein accession | YP_775530 |
|---|
| Protein GI | 115358392 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1796] DNA polymerase IV (family X) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCC ACAATGCCGA GTGCGCGGCC GTATTCGCCG AAATCGCCGA CATGCTCGAG
ATCCAGGGCG CGAATCCGTT CCGGGTGCGC GCCTATCGCA ACGCGGCCCG TACGATTGCC
GAGTACGGGC GCGACATTCC GGCGATGATC GCGAACGGTA GCGATCTCGG CCAGATTCCA
TCGATCGGCG CCGATCTCGC GGCGAAGCTG CGCGAGATCG CCGCGACCGG CACCTGCGAA
CTGCAGCAAA CGCTGCGCCA TGCGTTGCCG GGCGCGATCG TCGAACTGCT CGACGTGCCG
GGGCTCGGCG CGAAACGCGT GAAGGCGCTG CATGATGCAT TGCACGTCGA CTCGCTCGAG
CAGTTGCGCG CCGAAGCGAA GAGCGGGCAC GTGCGCGCGC TGCCGGGCTT CGGCGCGAAG
ACCGAAGCCC ATCTGCTCGA CGCGATCGAC GAGCGCCTGC AGCGCGAACC GCAGCGCTTC
CTGCTGCCCG ATGCCGCGCA ATCGCTGCGG CCGATGCTGG AGCGGCTGCG CCAGGTGGCC
GGCGTCGGCG AAGCGGTGCC GGCCGGCAGT TTTCGGCGCT GCCGCGAGAC GGTTGGCGAT
CTCGACATCC TCGTGAGCGC ACAAGATGCG GCCGCGGTGG CCGACGCGTT CGTCAGCTGC
GGCGACGTCG CGCGCGTGCT CGCGAACGGC AAGACGCGTT CGAGCGTGAT GCTCGGCAAC
GGGCTGCAGG TCGACCTGCG TGTCGTCGAC GCCGACGCAT TCGGCGCGGC GCTCGTCTAT
TTCACCGGAT CGAAGGCGCA CAACATCGCG CTGCGCCGGA TCGCGCAGGC CGGCGGCCTG
AAGATCAACG AATACGGCGT GTTCCGCGGC GACGAGCGGA TCGCGGGCGC GACGGAGGCT
TCCGTCTACG AGGCGATCGG CCTTCACTGG GTGCCGCCCG AATTGCGCGA GGGCCGTGGC
GAGATCGACG CGTCGCGCGC CGGCACGCTG CCGGCGCTGG TCGAGCGCAA GCATCTTCAT
GGCGATCTGC ACGCGCATAC CGACGCGTCG GCCGGGCGCG ACAGCCTGCG TGCGATGGCG
GACGCGGCCC GCGCGCGCGG GCTCGCGTAT CTGGCCGTCA CCGATCGCAT GCCGGACGCC
GGCGGCGGCC GTACCGATTG CGACTGGCTC GTGCGGCAGA TCGATGAGAT CGACCGCCTC
AACGCGTCGT TCGACGACTT CGTGCTGTTG AAGGGCGTCG AGGCCGGCAT TCGCGAGGAC
GGCAGCCTCG ATGTGCCCGA CGACGTGCTC GGCCGGCTCG ACCTCGTCGT CGGCGCGGTG
CGCGACGGCT TCGACCTGCC GGGCGACAGG CAGACCGAGC GGATCCTGCG CGCGATCGAT
CATCCGTATT TCACGATCCT CGCGCATCCG ACCGGCCGGC TGCTCGGCGA ACGCGACGCC
TGCGAACTCG ACGTGCCGCG CGTGCTCGCC GCAGCCGCCG CGCGCCGCTG CTTCGTCGAA
CTCGACGGCG ACCCGCGGCG GCTCGATCTG CCGGACCTGT GGTGCCGCGA GGCAGCGAAG
GCCGGCGTCG CGGTAGTGAT CGGCTCGGAC GCCCGCTGTG CGGACGATTT CGACAATCTC
GACTACGGTA TCGGCCACGC GCGGCGCGGC TGGCTCACGC GGCACGACGT GCTCAACACG
CGCACGCTCG CGCAACTGCG GCCGCTGCTG GCGCGCACGA TGGGCGGTGC GGGCAGCGCG
AGCGGCGCGT CGAAGCGCGA CCGCCCGAAG GGCGCGTGA
|
|---|
| Protein sequence | MPIHNAECAA VFAEIADMLE IQGANPFRVR AYRNAARTIA EYGRDIPAMI ANGSDLGQIP
SIGADLAAKL REIAATGTCE LQQTLRHALP GAIVELLDVP GLGAKRVKAL HDALHVDSLE
QLRAEAKSGH VRALPGFGAK TEAHLLDAID ERLQREPQRF LLPDAAQSLR PMLERLRQVA
GVGEAVPAGS FRRCRETVGD LDILVSAQDA AAVADAFVSC GDVARVLANG KTRSSVMLGN
GLQVDLRVVD ADAFGAALVY FTGSKAHNIA LRRIAQAGGL KINEYGVFRG DERIAGATEA
SVYEAIGLHW VPPELREGRG EIDASRAGTL PALVERKHLH GDLHAHTDAS AGRDSLRAMA
DAARARGLAY LAVTDRMPDA GGGRTDCDWL VRQIDEIDRL NASFDDFVLL KGVEAGIRED
GSLDVPDDVL GRLDLVVGAV RDGFDLPGDR QTERILRAID HPYFTILAHP TGRLLGERDA
CELDVPRVLA AAAARRCFVE LDGDPRRLDL PDLWCREAAK AGVAVVIGSD ARCADDFDNL
DYGIGHARRG WLTRHDVLNT RTLAQLRPLL ARTMGGAGSA SGASKRDRPK GA
|
|---|
| |