Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3632 |
Symbol | |
ID | 4312528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 472006 |
End bp | 473397 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151474 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_775520 |
Protein GI | 115358382 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0660545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGC CAATAACGCG CGATAAGAGC GCCGGCGCGG GGAGGACTTC CGGGCAGCGT CCTCTGATTT ACTGGACGCA GTCGCCTTCC GTCATGCTTC GCAAGGAACT CGCGCGACGC GACTGGAAAG TGACGATCGT CGCGCACGCG AGCGAGCTGC GCGACACCTC GGGCGAAATC ACCTGCGGCA TCCTCGACCT GAGCGGCGGC CACGCCGACG CGATCGGCAG CATCGCGTCC ACCTGCGCGT CGATGCGCGA TGTCGTGTGG GTCGCACTGG TCGAGACCGG TCAGACCGCG TCGCCGAACG TGCGCGCGCT GTTGCGCGAC TATTGCTTCG ACTACATCAC GTTGCCCGCG TCGCATCAGC GGATCGCCGA CACGGTCGGC CATGCGTACG GAATGGAATG CCTGTTCGCG CGCGATCGCG AACGCCTCGA ATCGCAGGAG AACGGCATCG TCGGCACCTG CAGCGCGATG CTGCGGCTGT TCGATACGGT GCGGCGTTTC GCGCGCACCG ACGCACCGGT ATTCGTGTTC GGCGAGACGG GAACCGGCAA GGAGCTGACG GCCGTCGCGA TCCATCGTCA TTCGGAGCGG CGCAACGGCC CGTTCGTCGC GGTCAACTGC GGCGCGATCC CGCCGCATCT ATTGCAATCG GAACTGTTCG GCTACGAGCG CGGCGCGTTT ACCGGCGCGA ACGCGCGCAA GGCCGGCTAC GTCGAAGCCG CGAACGGCGG CACGCTGCTG CTCGATGAAA TCGGCGATCT GCCGCACGAG AGTCAGGCGA GCCTGCTGCG CTTCCTGCAG GAGCGCGCGA TTCACCGCCT CGGCGGCAGC GATCCGGTGC CGGTCGACGT GCGGATCGTC TCGGCGACGC ACGTCGACCT GCGCGAGGCG ATGGAAGAAG GGCGGTTTCG CGCGGATCTG TTCCACCGCC TGTGCGTGAT GCGCATCGAC CAGCCGCCGC TGCGCGCGCG CGGCAAGGAC ATCGAACTGC TCGCGCATCA CATGCTCGAA CGCTTTCGCG GCGACGCGCG CCATCGCGTG CGCGGCTTCT CGACGGATGC GATCACGGCG CTCTACAAGC ACGACTGGCC GGGCAATGTC CGCGAGCTGA TCAACCGTGT GCGGCGCGCG GTCGTGATGA CGGAAGGACG CCTGATTACC GCGCAGGATC TCGAGCTCGA ATACTGTCTC GACGCGGCTT CGCCGTCCGT CGCCGACATC CGCAAGTCGA TCGAGCGCGA AGCGATCGAA ACCGCGCTGC TGCGCACGCG CGGCCGCGTC GCTGCTTCCG CGCGCGAGCT CGGCGTGTCG CGCGCGACGC TCTATCGCTG GATGGAAGCG TACGGCATCG AGCGGCCGCG CGGCACGGGG TCGTCTGACT GA
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Protein sequence | MNMPITRDKS AGAGRTSGQR PLIYWTQSPS VMLRKELARR DWKVTIVAHA SELRDTSGEI TCGILDLSGG HADAIGSIAS TCASMRDVVW VALVETGQTA SPNVRALLRD YCFDYITLPA SHQRIADTVG HAYGMECLFA RDRERLESQE NGIVGTCSAM LRLFDTVRRF ARTDAPVFVF GETGTGKELT AVAIHRHSER RNGPFVAVNC GAIPPHLLQS ELFGYERGAF TGANARKAGY VEAANGGTLL LDEIGDLPHE SQASLLRFLQ ERAIHRLGGS DPVPVDVRIV SATHVDLREA MEEGRFRADL FHRLCVMRID QPPLRARGKD IELLAHHMLE RFRGDARHRV RGFSTDAITA LYKHDWPGNV RELINRVRRA VVMTEGRLIT AQDLELEYCL DAASPSVADI RKSIEREAIE TALLRTRGRV AASARELGVS RATLYRWMEA YGIERPRGTG SSD
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