| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3627 |
|---|
| Symbol | |
|---|
| ID | 4312523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 465882 |
|---|
| End bp | 467021 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638151469 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_775515 |
|---|
| Protein GI | 115358377 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCA TACGACGCGG CCGCGCTCCG GCGTCGCCGC AAGGCACCGG GCATCCGGCC
GTCCGCTCTT CGCTCGTCCA GAACCCGTTC ATGACCGACC TGACCATCGC CATCTGCAAC
TACAACCACG GCGCATACCT GCGCGACGCG ATCGATTCGG CGCTCGCGCA GACGGTGCAC
GGTGTACGCG TGCTGGTCGT CGACGACGGT TCCACCGACG ATTCGCGCGA CATCATTCAC
TCATATGGCG AGCGCGTGAC GGCGGTGTTC CAGGAAAATC GCGGTCAGGT TGCCGCGTAC
AACCGCGCAC TCGAGCATGT CGCGACGCGC TACGTGATCC TGCTCGACGC GGACGACCTC
CTCTATGCGG ACGCCGCGGC CCGCGTGCTG GCCGCGTTTG CGTCCGGCGA CTTCGTGAAG
GTCCACTTCC GGCTCGACGT GATCGCGCGT GACGGTGCGA TGACCGGTGC GAGCGTGCCG
CAGCAGTCCG TCGACACCGA TTGCGGCCGC CTGTTGCGCG CGGGCTGGCT GTATCCGTCG
CCGCCCGCGT CCGGCAACGC GTACCGGGTC GACGCGCTCA AGCGCATCTT TCCGGTGCCT
GTCACGCCCG ACAACCTGCA TGGCGCGGAT TTCTATGCGA TCTACGGCAT CGCATTGCTC
GGCGCCGTGC ACATGATCGA CGCAACGCTC GGTGGCTATC GCGTGCATCA GCAGCCAGAT
TCACGCCCGG TCGCCGACAC ACCTGCCCTT GCACTCACCA ATTCGGAAGA CGCCGCGACG
GGCGCGTTGA AGGCGGAACG CCGATGGGCG ACGCTGCGCA CGCTCGCCGG CACGCGGTTG
CACGAAGCGT TGCCGATCGC GCCGCTCGAC TTCGCGATCG AAAAGGCCCG CTTCGCCAGC
ACGCTGTATC ACGCGCCGCT CGTGCGGCGC TGGCGCTGGT TCCTGTGCGA ATCCGGACGC
TACTGGCATA CCGTGCTGCG CAATCCGTTC TGGCGTCCTG CAAAGAAGGT GGCCGTCGCC
GGGCTGTCGC TCGCGTGCCT GCTGCCATCG TCAACGCTCA GCAACCGTGC GATTCGCTAT
ATCTCCAATC CGCTTGCGCG CGTGCGCAAG TCGTCCGGGC AGCGCGTCGG CACACGATAG
|
|---|
| Protein sequence | MATIRRGRAP ASPQGTGHPA VRSSLVQNPF MTDLTIAICN YNHGAYLRDA IDSALAQTVH
GVRVLVVDDG STDDSRDIIH SYGERVTAVF QENRGQVAAY NRALEHVATR YVILLDADDL
LYADAAARVL AAFASGDFVK VHFRLDVIAR DGAMTGASVP QQSVDTDCGR LLRAGWLYPS
PPASGNAYRV DALKRIFPVP VTPDNLHGAD FYAIYGIALL GAVHMIDATL GGYRVHQQPD
SRPVADTPAL ALTNSEDAAT GALKAERRWA TLRTLAGTRL HEALPIAPLD FAIEKARFAS
TLYHAPLVRR WRWFLCESGR YWHTVLRNPF WRPAKKVAVA GLSLACLLPS STLSNRAIRY
ISNPLARVRK SSGQRVGTR
|
|---|
| |