Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3619 |
Symbol | |
ID | 4312515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 454505 |
End bp | 456361 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638151461 |
Product | hypothetical protein |
Protein accession | YP_775507 |
Protein GI | 115358369 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGCCGA TAACGTTCGG CAGCTGCGTG GGGTGGCTGC ACGAAGGACA GACGACACAA GGCGTGATCC TGTGCGAATC GCTGGGGCAC GAGGCTTCGT GGACGCACAA GCTGATGCGC GCGATCGCGG AGCGGCTGGC GCGCGACGGC GTGACGGTAT TGCGATTCAA CTATCCGTGC ACCGGCGACT CGGCGGGCGA CGATCGCGAT GCCGGTCGGC ATGCCGCGTG CATCGCCAGC ATTCACGACG CGATCGACCT GTTGCGGGAC CAGGCCGGCG TCACCGCGCT GACGCTCGTC GGGATCCGCG CAGGTGCGCT GTTCGCGATG CTGGCCGCGG CGGGCATGGG CTCGCGCGAG TCGCCGCGCG TCGATGCGCT GGTGGCGCTC GCCCCGGTCG TGCGTGGCCG CGCCTATCTG CGCGAGCTGT CGTTCGTGCA TCGCCAGTGG CTCGACACCA CGTCGCCGGC AATCCGCGCC GCGCATCGCG ACGAACCGTG CATGAACGTG CTCGGCCACC GCTTTCCCGC CGATTTCGTC GATGCGCTGA AGGCGCTCGA TCTGTGCGAC GTCGTGCGCG ATGCGCCGAC ATTGCCCGGC GCGATGCTGC TGATCCAGCC CGATCAGGGC GACGGGCCGG CATTGCGCGA CGCGTTGCTC GCGCGCGGCG TGGACGTGAC GAGCGATCCG TTCCGCGAAT GGACGACGAC GATGCTGGAC GGTACGCGCT CGCGCTTGCC GCTTGCTGCG ATCGACACGC TCGCGAACTG GATCACCGAA CGCGCGCCGC ATAAGCTGGC CGGTGCCGAC ACCGCGTCGC GAGTGGACCC CGCATGGAAT GGCGAGTCGG CCGTCGCACT CGACATGAAC GACATGACCG AGCAGGTCGT CGCGGTCGGT CCGGACCGGC TGGTCGGCGT GCTGTGCCGG CCCGCCGATA CGCGGCCGGC GAAGCCGGTC GGCCCGGCGG TCGTGATCGC GAACACGTCG ACGAATCCGC GCAGCGGCGA AGGGCGCTTC AGCGTGCGGC TCGCCCGCAC GCTGGCACGC GCCGGCGTGA CGACGCTGCG GATCGACGTG CATGGCGTCG GCGACAGCGG GCCCGCCGTG ACCGACGATC AGTCGGGCGT CGTGTATTCG ACGCAGTCGA GCGACGACGT GGCGGCTGCC GCGGACTGGC TGCGTGCGCT CGGTCATCCC GAAGTGGTCG CGGCCGGCAT TTGCTCCGGC GCGTATGCGG CGTTGCATGC GGCATTGAAG ACGCCGTCGC TCGGCGGCGT GATCGCGGTC AATCTCGCGC GCTTCGTGTG GCCGGCAGGG CTCACGCTCG ACGCGGTGCA GAAGCAGCGG AACAACTCGG TGCGCGGCTA CTGGCTGTCG GTGCGCGACT GGCAGAAGTG GAAGCGCCTC GTGCGGGAGC GCCGCGACCT GCGTCCGATC GTGCGGGCCG TGGCCGCGAA TGCGATCGCG CGGGTCAGCG TGCCTGCGAA GGCGCTCGCC GCGCGCGCCG GGTGGAAGCC GCGCAGCGGC ACGCCGCGCG GCGTGATGCA TGAACTCGCG CAGCGCAACG TCAGGACGAC ACTCGTGTAC GGCGCACTCG ATCCCGGCAT CGACGATGTC CGGCGTCACT TCGGCGCGAT CGAGCACGCG TTCCGGCGCT CGCGTCACGT GCGCTTGTAT CTCGAGCCGG AGGTCGACCA CGCGGTGTAC GGCGCGGCGG GCACGGACAT CGTAATCGAC CTGTGCATGC AGGCGCTGGG CCACGACTCG GCCCGGCCGG TCGCGCGCGT CGCCGATCCG GCCACACAGG AGGCGGCCGC GCGATCGTAC GCGAACGTGT CGGTCGGCAG ATCGTGA
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Protein sequence | MKPITFGSCV GWLHEGQTTQ GVILCESLGH EASWTHKLMR AIAERLARDG VTVLRFNYPC TGDSAGDDRD AGRHAACIAS IHDAIDLLRD QAGVTALTLV GIRAGALFAM LAAAGMGSRE SPRVDALVAL APVVRGRAYL RELSFVHRQW LDTTSPAIRA AHRDEPCMNV LGHRFPADFV DALKALDLCD VVRDAPTLPG AMLLIQPDQG DGPALRDALL ARGVDVTSDP FREWTTTMLD GTRSRLPLAA IDTLANWITE RAPHKLAGAD TASRVDPAWN GESAVALDMN DMTEQVVAVG PDRLVGVLCR PADTRPAKPV GPAVVIANTS TNPRSGEGRF SVRLARTLAR AGVTTLRIDV HGVGDSGPAV TDDQSGVVYS TQSSDDVAAA ADWLRALGHP EVVAAGICSG AYAALHAALK TPSLGGVIAV NLARFVWPAG LTLDAVQKQR NNSVRGYWLS VRDWQKWKRL VRERRDLRPI VRAVAANAIA RVSVPAKALA ARAGWKPRSG TPRGVMHELA QRNVRTTLVY GALDPGIDDV RRHFGAIEHA FRRSRHVRLY LEPEVDHAVY GAAGTDIVID LCMQALGHDS ARPVARVADP ATQEAAARSY ANVSVGRS
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