Gene Bamb_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3619 
Symbol 
ID4312515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp454505 
End bp456361 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content70% 
IMG OID638151461 
Producthypothetical protein 
Protein accessionYP_775507 
Protein GI115358369 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCCGA TAACGTTCGG CAGCTGCGTG GGGTGGCTGC ACGAAGGACA GACGACACAA 
GGCGTGATCC TGTGCGAATC GCTGGGGCAC GAGGCTTCGT GGACGCACAA GCTGATGCGC
GCGATCGCGG AGCGGCTGGC GCGCGACGGC GTGACGGTAT TGCGATTCAA CTATCCGTGC
ACCGGCGACT CGGCGGGCGA CGATCGCGAT GCCGGTCGGC ATGCCGCGTG CATCGCCAGC
ATTCACGACG CGATCGACCT GTTGCGGGAC CAGGCCGGCG TCACCGCGCT GACGCTCGTC
GGGATCCGCG CAGGTGCGCT GTTCGCGATG CTGGCCGCGG CGGGCATGGG CTCGCGCGAG
TCGCCGCGCG TCGATGCGCT GGTGGCGCTC GCCCCGGTCG TGCGTGGCCG CGCCTATCTG
CGCGAGCTGT CGTTCGTGCA TCGCCAGTGG CTCGACACCA CGTCGCCGGC AATCCGCGCC
GCGCATCGCG ACGAACCGTG CATGAACGTG CTCGGCCACC GCTTTCCCGC CGATTTCGTC
GATGCGCTGA AGGCGCTCGA TCTGTGCGAC GTCGTGCGCG ATGCGCCGAC ATTGCCCGGC
GCGATGCTGC TGATCCAGCC CGATCAGGGC GACGGGCCGG CATTGCGCGA CGCGTTGCTC
GCGCGCGGCG TGGACGTGAC GAGCGATCCG TTCCGCGAAT GGACGACGAC GATGCTGGAC
GGTACGCGCT CGCGCTTGCC GCTTGCTGCG ATCGACACGC TCGCGAACTG GATCACCGAA
CGCGCGCCGC ATAAGCTGGC CGGTGCCGAC ACCGCGTCGC GAGTGGACCC CGCATGGAAT
GGCGAGTCGG CCGTCGCACT CGACATGAAC GACATGACCG AGCAGGTCGT CGCGGTCGGT
CCGGACCGGC TGGTCGGCGT GCTGTGCCGG CCCGCCGATA CGCGGCCGGC GAAGCCGGTC
GGCCCGGCGG TCGTGATCGC GAACACGTCG ACGAATCCGC GCAGCGGCGA AGGGCGCTTC
AGCGTGCGGC TCGCCCGCAC GCTGGCACGC GCCGGCGTGA CGACGCTGCG GATCGACGTG
CATGGCGTCG GCGACAGCGG GCCCGCCGTG ACCGACGATC AGTCGGGCGT CGTGTATTCG
ACGCAGTCGA GCGACGACGT GGCGGCTGCC GCGGACTGGC TGCGTGCGCT CGGTCATCCC
GAAGTGGTCG CGGCCGGCAT TTGCTCCGGC GCGTATGCGG CGTTGCATGC GGCATTGAAG
ACGCCGTCGC TCGGCGGCGT GATCGCGGTC AATCTCGCGC GCTTCGTGTG GCCGGCAGGG
CTCACGCTCG ACGCGGTGCA GAAGCAGCGG AACAACTCGG TGCGCGGCTA CTGGCTGTCG
GTGCGCGACT GGCAGAAGTG GAAGCGCCTC GTGCGGGAGC GCCGCGACCT GCGTCCGATC
GTGCGGGCCG TGGCCGCGAA TGCGATCGCG CGGGTCAGCG TGCCTGCGAA GGCGCTCGCC
GCGCGCGCCG GGTGGAAGCC GCGCAGCGGC ACGCCGCGCG GCGTGATGCA TGAACTCGCG
CAGCGCAACG TCAGGACGAC ACTCGTGTAC GGCGCACTCG ATCCCGGCAT CGACGATGTC
CGGCGTCACT TCGGCGCGAT CGAGCACGCG TTCCGGCGCT CGCGTCACGT GCGCTTGTAT
CTCGAGCCGG AGGTCGACCA CGCGGTGTAC GGCGCGGCGG GCACGGACAT CGTAATCGAC
CTGTGCATGC AGGCGCTGGG CCACGACTCG GCCCGGCCGG TCGCGCGCGT CGCCGATCCG
GCCACACAGG AGGCGGCCGC GCGATCGTAC GCGAACGTGT CGGTCGGCAG ATCGTGA
 
Protein sequence
MKPITFGSCV GWLHEGQTTQ GVILCESLGH EASWTHKLMR AIAERLARDG VTVLRFNYPC 
TGDSAGDDRD AGRHAACIAS IHDAIDLLRD QAGVTALTLV GIRAGALFAM LAAAGMGSRE
SPRVDALVAL APVVRGRAYL RELSFVHRQW LDTTSPAIRA AHRDEPCMNV LGHRFPADFV
DALKALDLCD VVRDAPTLPG AMLLIQPDQG DGPALRDALL ARGVDVTSDP FREWTTTMLD
GTRSRLPLAA IDTLANWITE RAPHKLAGAD TASRVDPAWN GESAVALDMN DMTEQVVAVG
PDRLVGVLCR PADTRPAKPV GPAVVIANTS TNPRSGEGRF SVRLARTLAR AGVTTLRIDV
HGVGDSGPAV TDDQSGVVYS TQSSDDVAAA ADWLRALGHP EVVAAGICSG AYAALHAALK
TPSLGGVIAV NLARFVWPAG LTLDAVQKQR NNSVRGYWLS VRDWQKWKRL VRERRDLRPI
VRAVAANAIA RVSVPAKALA ARAGWKPRSG TPRGVMHELA QRNVRTTLVY GALDPGIDDV
RRHFGAIEHA FRRSRHVRLY LEPEVDHAVY GAAGTDIVID LCMQALGHDS ARPVARVADP
ATQEAAARSY ANVSVGRS