| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3615 |
|---|
| Symbol | |
|---|
| ID | 4312511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 447865 |
|---|
| End bp | 448584 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638151457 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_775503 |
|---|
| Protein GI | 115358365 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.106494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCT GCCGCACGCA CGCTCCCGCC TATGTTCCCG AAACCCGCTT CGGCATCTGG
TTTCTTCGCA CGCATACCTG GGAGCATCAC GTGCTTAGGG TGGCCATCGA CGATCTCAAG
CAGCTCATCG GCGCGCCGCT GCCGAAGGCT CCCGTCATCC TCGATGCGGG ATGCGGCCAG
GGCAAATCGT TCCGCCTGCT CGGCGAAGCG TTCGCGCCCG GCAAAATCAT CGGCATCGAT
TGTCACGACG ACTCACTCAC GCATGCGTCG GAAGCCGCGC GTCGCTGCGC CACGCCCGTC
GAACTGCATC GTGCGGACTG CACACAGATT CCGCTCGCCG ATTCGAGCGT CGACATCGTG
TTCTGCCATC AGACCTTTCA TCATCTCGTC GACCAGGAGC ATGCGCTGGC CGACTTTCGC
CGCGTACTGA AACCCGGCGG GCTGCTGCTG TTCGCCGAAT CGACCGACGC ATACATCAAG
TCGTGGGTGA TCCGGCTGCT GTTCCGTCAT CCGATGGAAG TTCAGAAAAG TGCCGACGGC
TACCTTGCCA TGCTGCGCGA CGGCGGGTTC ACGTTCGACG CCCGCAATGT GTCGTTCCCG
TACCTGTGGT GGAGCCGCGC GAAAGACTTC GGACTCCTCG AGCGCATCGG CCTGTACGCA
CCGAAGCCGG GCAAGCGCCG CGAGACGCTC GTGAACGTCG CCGCGCGCAA GCCCGCCTGA
|
|---|
| Protein sequence | MTSCRTHAPA YVPETRFGIW FLRTHTWEHH VLRVAIDDLK QLIGAPLPKA PVILDAGCGQ
GKSFRLLGEA FAPGKIIGID CHDDSLTHAS EAARRCATPV ELHRADCTQI PLADSSVDIV
FCHQTFHHLV DQEHALADFR RVLKPGGLLL FAESTDAYIK SWVIRLLFRH PMEVQKSADG
YLAMLRDGGF TFDARNVSFP YLWWSRAKDF GLLERIGLYA PKPGKRRETL VNVAARKPA
|
|---|
| |