Gene Bamb_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3605 
Symbol 
ID4312501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp438537 
End bp438965 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID638151447 
Productthioesterase superfamily protein 
Protein accessionYP_775493 
Protein GI115358355 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA ACCGTCCGCC GCTCACCGCG ACCGCACGCG TCGAGGTGCT GTTCCACGAT 
GTCGACGCAA TGAACGTCTG CTGGCACGGG CATTACCTGA AGTACTTCGA AAGCAGCCGC
GCCGCACTGC TGCGGATGAT CGACTACGAC TATCCGGCGA TGCTGGCGTC GGGCTATGTG
TGGCCCGTGG TGGAGGCGCA TCTGAAATAC GTTCGCCCGG CCCATTACAG CCAGCAGCTC
GACGTGCGCG CGACGCTCCT CGAATTCGAG AACCGGCTGA AGATCGGTTA CGAAATCGTC
GACGCTGCCT CCGGCGAGCG TTTGACGAAG GGCTATACGG TGCAACTTGC GATCGATGCG
ACGACGCGCG AACTGCAGTT CGTGTCGCCG CCTGCCTTGA TCGAAAGGGT GCGTGCGCAA
TGGGCCTGA
 
Protein sequence
MNENRPPLTA TARVEVLFHD VDAMNVCWHG HYLKYFESSR AALLRMIDYD YPAMLASGYV 
WPVVEAHLKY VRPAHYSQQL DVRATLLEFE NRLKIGYEIV DAASGERLTK GYTVQLAIDA
TTRELQFVSP PALIERVRAQ WA