Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3591 |
Symbol | |
ID | 4312487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 420829 |
End bp | 425355 |
Gene Length | 4527 bp |
Protein Length | 1508 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638151433 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_775479 |
Protein GI | 115358341 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.485917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCA CCGCCACCCG CCCCGCCCAC GCGCTCGACG TGTTCCACCC GGCCGTCGCC GCATGGTTCC GTCGCACGTT CGCCGCGCCG ACCGGCGTGC AGGCGCTCGC GTGGCCGCAC ATCAAGGCGG GCCGGTCGAC GCTCGTGGCC GCGCCGACCG GCTCCGGCAA GACGCTCACC GCGTTCCTGT GCGCGCTCGA TGATCTCGTG CGCGATGCGC TCGCGCACGA CGGGGCACTG CCCGACGCGA CGCTCGTCGT CTACGTGTCG CCGCTGAAGG CGCTGTCGAA CGACATCCAC GTGAACCTCG ACGCGCCGCT CGCCGGTATC GCCGAATCGC TCGCGCAGCT CGGCTTGCCG GTGCCCGCGA TCCGCACCGC CGTGCGCACC GGCGACACCC CGCAGGCCGA ACGCGCGGCG CTGCGCAAAC GCGCGCCGCA CATCCTCGTG ACGACGCCCG AGTCGCTGTA CGTGTTGTTG TCCTCGACGT CGGGACGGCA GATGCTGTCG AGCGTGCGTT CGGTGATCGT CGACGAGATC CACGCGCTCG CGTCATCCAA GCGCGGCAGC CATCTCGCGC TGTCGCTCGA ACGCCTCGAT GCGTTGACGG GCCGCGCGTT GCCGCGCATC GGATTGTCGG CCACGCAGAA ACCGATCGAC GCGGTCTCGC GCTTCCTGGT CGGCGGCCCG GCCGATGCGC CGCGCGACTG CACGATCGTC GACACCGGCC ACACGCGTGA ACGCGACCTC GCGCTCGAAC TGCCCAACGT GCCGCTCGGG CCGGTGATGG CGACCGACGT GTGGGACCAG GTGTACGACC GCATCGCCGC GCTCGCGGCC GCGCATCGCA CGACGCTCGT GTTCGTGAAC ACCCGGCGCA CCGCGGAGCG CATGGCGCGC CATCTCGCCG AGCGCCTCGG CAAGGACGCG ATCGCCGCGC ACCACGGCAG TCTCGCGAAG GAACATCGCC TCGACGCCGA ACAGCGGCTC AAGCGCGGCG AGCTGAAGCT GCTCGTCGCG ACCGCGTCGC TCGAACTCGG CATCGACATC GGCGACGTCG ATCTCGTATG CCAGGTCGGT TCGCCGCGCG GGATCGCACC GTTCCTGCAG CGCGTCGGCC GTTCCGGGCA CCAGGTCGGC GGCGTGCCGA AGGGCCGCCT GTTCCCGTTG TCGCGCGACG AGCTGGTCGA ATGCGCGGCG CTGCTCGACT GCGTGCAGCG CGGCGAGCTC GACGCATTGC GGATTCCCGA GGCGCCGCTC GACGTGCTCG CGCAGCAGAT CGTCGCCGAA GTCGCCTGCG CGGAATGGCA GGAGGATGCG CTGTACGCGA GCTTCACGCG TGCGGCGCCG TACGCGCGCC TGTCGCGCGA ACGCTTCGAC GAGGTCATGA AGATGCTCGC CGAAGGCTTC ACGAGCCGCC GCGGCGTGCG CGGCGCGTAT CTGCATCGCG ACGTGGTCGG CGGCACGGTG CGCGGACGCC GCAACGCGAT GATGACCGCG ACGACCTCGG GCGGCACGAT TCCCGACATG GCCGACTACG CGGTGTTGCT CGAACCGCAG GGCATCCAGG TCGGCACCGT CAACGAGGAT TTCGCGGTCG AGAGCCTGGC CGGCGACGTG TTCCAGCTCG GCAACCAGTC GTACCGGATC ATTCGCGTGG AAACGGGCCG CGTGCGCGTC GAGGACGCAC AAGGCCAGTC GCCGAGCATT CCGTTCTGGC TCGGCGAGGC GCCTGGGCGC AGCGACGAAC TGTCGGCCGC GGTCGGCCGG CTGCGCGCGC GGCTCGACGC GCTGTTCGCC GAAGGCGATC GCAACACGGA TGCCGGCGGA CGCAAGCGCG GTGCGAGCGG CGTGAACGGC GCGAATGGTG ATGCAACCGG TAAGACGGCC ACGCGCGGCA AGGCCAAACG AGCCGCCGAA GCCTCAACCG TCGCCGATTC GCGAAGCGAT GCCGACGGCA CCGCGATCGT CCCGGCCGAA AGCCGCCTCG CGCCGGCGCT GCGCTGGCTC GCCGACGATC TGCATCTGGC TCCGGACGCG GCCCGCCAGA TCGTCGACTA CCTCGCCCGC ACGCGCGCGG CGCTCGGCGC GCTGCCGACG CAGGACACGC TCGTGATGGA GCGCTTCTTC GACGAGTCGG GCGGCACGCA GCTGGTGATC CATTCGCCGT TCGGCAGCCG CATCAACCGC GCGTGGGGAC TCGCGCTGCG CAAGCGCTTT TGCCGCACGT TCGACTTCGA GCTGCAGGCC GCCGCGACCG ACGACGCGAT CGTTCTGTCG CTGTCGCTCG CGCACAGTTT CGCGCTCGAC GAAGTGTGGC GCTACCTGCG CTCGGCCAGC GCCGAACAAG TGCTGATCCA GGCGCTGCTC GACGCGCCGA TGTTCGGCGT GCGCTGGCGC TGGAACGCGA CGACCTCGCT CGCGCTGCCG CGCTTCACCG GCGGCCGGCG CACCGCGCCG CAACTGCAGC GGATGAAGAG CGACGACCTG CTCGCGACCG TGTTTCCCGA ACAGGTCGCG TGCCTGGAAA ATGTCGTCGG CGAACGCGAG ATCCCGCACC ACCCGCTCGT CGACCAGACG CTCGACGATT GCCTGCACGA CGCGATGGAT ACCGACGGCT GGCTCGCGCT GCTGCGCCGG ATCGAGAGCG GCGCGATTGA ACTGATCGCA CGCGACTTGC CCGCGCCGTC GCCGCTCGCC GCCGAGATCC TGAACGCGAA GCCCTATGCG TTCCTCGACG ATGCGCCGCT CGAAGAGCGC CGCACGCAGG CCGTGCAGTC GCGCCGCTGG AGCGACCCCG AGTCGGCCGA CGATCTCGGC GCGCTCGACG CCGACGCGAT CGATGCGGTG CGCGACGAAG CGTGGCCGCT CGTGCGCGAT GCCGACGAAA TGCACGACGC GTTGCTCACG CTCGCATGCG TCGCCGACAG CGAAGCGCGG GCGCACGACG GCTGGCCCGA GCGGCTCGCG GAATTGACCG AACGCCGTCG TGCGACGAAA CTCGTCACAC CGGATGGCGC CACGCTGTGG GTGCCGGTCG AACGGCTGGT CTGCCTACGC GCGCTGCATC CCGACGCCCG TGTTGCACCG GCGCTGAAGG TGCCGGCCGC ATGCGCGCAG CCATGGGACG CCGACGCCGC GCTCGTCGAC GTGATCCGCG CGCGGCTCAC CGGATTCGGG CCGCTGACGC TCGACGCCAT CGCACAGCCG CTCGGCCTGC CGCCCGCGGC GATCGCGACG GCGCTCGCCG CACTGGAGCG CGAAGGCTAC GTAATGCGCG GCCGCTTCAC GCCCGGCGCG ACGACCGACG AATGGTGCGA ACGCCACCTG CTCGCGCGCA TTCATCGCTA TACGGTGAAA CGACTGCGCC GCGAGATCGA GCCCGTCGAG CGCGCCGATT TCATGCGCTT CCTGTTCCAC TGGCAGCGCC TGACGCCCGA TACGCGTGGA ACCGGCCGCG ACGCGCTCGC AGCCGTCCTC GAGCAGCTCG AAGGCTACGA AGCCGCGGCG AGCGCATGGG AAGACGCGCT CCTGCCCGCA CGGCTGACCG ACTATACGGC CGGCGGCCTC GACGATCTAT GCCGCTCGGG CAAGCTCGTG TGGACCCGCA TCGGCGCACC GGCCCGCGCG GCCGGCACGC CCGTGAAGAC GACGCCGGTC GTGCTGCTGC CCCGCCGCCA CCTCGGCGCA TGGCAGGCGC TGCGCGACCC GGACGCGCAA CCGGCGCTGT CCGCGCGCGC GACACAGGTG CGGGACGCGC TCGCCGCCCA TGGCGCGATG TTCTTCGATG CACTGCTCGA CGAACTGCAC ATGCTGCCCG TCGAACTCGA ACAGGCACTC GGCGAACTCG TGTCGGCCGG CCTCGTGAAT GCCGACAGCT TCGCCGGACT GCGAGCATTG CTGAAGCCGG CGGTCAAGCG CAGCGCGACG TATGCGCCGC GCACGCGGCG CGGCGGCGCA CTGATCGGCG GGATGGACGA TGCGGGCCGC TGGGCGCTCG TGCAACGCGT TTCGCCAACG AACGACGACG CGCCCACGCC GGCACCGAAG CGCGGTGCGC CCGCGACCGA TCCCGACGCG CTCGAACACA TCGTCTGGAC GCTGCTGCGC CGCTACGGTG TCGTGTTCTG GCGGCTGCTC GAACGCGAAG CCGACTGGCT GCCGAGCTGG CGCGAGCTCG TGCGCGTGCT GCAGCGGCTC GAAGCGCGCG GCGAGATTCG CGGCGGACGC TTCGTCGCCG GGCTCGCGGG CGAGCAATTC GCGCTGCCGG AGGCAATCCC GATCCTGCGC GAACTGCGTC GCCAACCGGG CGACGGCCAA TATGTGTGCG TGACCGGCGC CGATCCGCTG AACCTTGCCG GCACGCTGCT GCCCGGCGAC AAGGTGCCCG CGCTGGCCGG CAATCGCGTG CTGTTCCGCG ACGGCGTGCC CGTCGCGTCG CTCGTGGCGG GCGCGTTCCA CTACGCGCCC GAGCTGACCC CTGCCTCGCG CGAGGATGCG CGCCTGCGTC TCGCCCGCCG CTACTGA
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Protein sequence | MDVTATRPAH ALDVFHPAVA AWFRRTFAAP TGVQALAWPH IKAGRSTLVA APTGSGKTLT AFLCALDDLV RDALAHDGAL PDATLVVYVS PLKALSNDIH VNLDAPLAGI AESLAQLGLP VPAIRTAVRT GDTPQAERAA LRKRAPHILV TTPESLYVLL SSTSGRQMLS SVRSVIVDEI HALASSKRGS HLALSLERLD ALTGRALPRI GLSATQKPID AVSRFLVGGP ADAPRDCTIV DTGHTRERDL ALELPNVPLG PVMATDVWDQ VYDRIAALAA AHRTTLVFVN TRRTAERMAR HLAERLGKDA IAAHHGSLAK EHRLDAEQRL KRGELKLLVA TASLELGIDI GDVDLVCQVG SPRGIAPFLQ RVGRSGHQVG GVPKGRLFPL SRDELVECAA LLDCVQRGEL DALRIPEAPL DVLAQQIVAE VACAEWQEDA LYASFTRAAP YARLSRERFD EVMKMLAEGF TSRRGVRGAY LHRDVVGGTV RGRRNAMMTA TTSGGTIPDM ADYAVLLEPQ GIQVGTVNED FAVESLAGDV FQLGNQSYRI IRVETGRVRV EDAQGQSPSI PFWLGEAPGR SDELSAAVGR LRARLDALFA EGDRNTDAGG RKRGASGVNG ANGDATGKTA TRGKAKRAAE ASTVADSRSD ADGTAIVPAE SRLAPALRWL ADDLHLAPDA ARQIVDYLAR TRAALGALPT QDTLVMERFF DESGGTQLVI HSPFGSRINR AWGLALRKRF CRTFDFELQA AATDDAIVLS LSLAHSFALD EVWRYLRSAS AEQVLIQALL DAPMFGVRWR WNATTSLALP RFTGGRRTAP QLQRMKSDDL LATVFPEQVA CLENVVGERE IPHHPLVDQT LDDCLHDAMD TDGWLALLRR IESGAIELIA RDLPAPSPLA AEILNAKPYA FLDDAPLEER RTQAVQSRRW SDPESADDLG ALDADAIDAV RDEAWPLVRD ADEMHDALLT LACVADSEAR AHDGWPERLA ELTERRRATK LVTPDGATLW VPVERLVCLR ALHPDARVAP ALKVPAACAQ PWDADAALVD VIRARLTGFG PLTLDAIAQP LGLPPAAIAT ALAALEREGY VMRGRFTPGA TTDEWCERHL LARIHRYTVK RLRREIEPVE RADFMRFLFH WQRLTPDTRG TGRDALAAVL EQLEGYEAAA SAWEDALLPA RLTDYTAGGL DDLCRSGKLV WTRIGAPARA AGTPVKTTPV VLLPRRHLGA WQALRDPDAQ PALSARATQV RDALAAHGAM FFDALLDELH MLPVELEQAL GELVSAGLVN ADSFAGLRAL LKPAVKRSAT YAPRTRRGGA LIGGMDDAGR WALVQRVSPT NDDAPTPAPK RGAPATDPDA LEHIVWTLLR RYGVVFWRLL EREADWLPSW RELVRVLQRL EARGEIRGGR FVAGLAGEQF ALPEAIPILR ELRRQPGDGQ YVCVTGADPL NLAGTLLPGD KVPALAGNRV LFRDGVPVAS LVAGAFHYAP ELTPASREDA RLRLARRY
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