| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3564 |
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| Symbol | |
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| ID | 4312460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 386444 |
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| End bp | 387640 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638151406 |
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| Product | porin |
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| Protein accession | YP_775452 |
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| Protein GI | 115358314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.219626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.589803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAC CGCACTACCC GCACTATCGT TTTGCAATCC TGATTTTATC GGCCGCATCG
TTCGGCGCTG GCGCAGCGCA CGCGCAGAGC AGCGTGACGC TGTACGGCGT GGTCGACGAT
TCGATTGCGT ACGTGAACAA CCAGCAAGGC CACTCGAACG TGTACCTGCG CGACGGCAAC
CTGTATGCGT CGAAGTTCGG GCTGCGCGGC GACGAGGATC TCGGCGGCGG CACGCACGCG
ATCTTCGATC TGCAAGCCGG CTTCAACCTG AACACCGGCG CGCAAGCGGC CGCCGGCACG
ATCTTCAACC GCCAGGCCTA TGTCGGGCTG CGCAACGACC ATTACGGCAC GGTGACGGCC
GGCCGCCAGT ACACGCCGTA CTTCCTGCTG GTCGGACCGT ACGCGTCGAG CAGCTGGTTG
ACCGGCGCGA CCGGCGCGCA TCCGGGCGAT ATCGACGGCC TCGACACGAC GATCCGCGTG
AACAATTCGG TTACCTATAC GTCGCCGACC CTCTCCGGGC TGACCGCGAG CGCAATGTAC
GCGTTCGGCG GCATCGCTGG TGCGACCGGC AAGGGCAACA CATTCAGCGC CGCGCTGCGC
TATGCGAACG GGCCGGTCGG GATCGCGGCC GGCTACCTGC GCATCAACAG CTCGGGTTCG
TCGGCCGGCT TCCTGAATCC GGCGACCGCG GCGTCGGGCA GCTTCGCGGT GTCCGTGCTG
AACCAGGGCT ACCTGAGCGC GAAGGCCGTC GAGCAGGTCG CGGCGGCCGG CAACTACACG
CTGGGCAACC TGACGATGGG CCTGAACTAC TCGAACGTGA AGTACCTGCC CGGCAACGGC
TCCGCGTTCA CGGATACGGC CGTGTTCAAT ACCTACGGCG CGCTCGCCGC GTACCGCTTC
ACGCCGACAT TCTCCGTGGC CGGCGCGTTC GCGTACACGC TCGCGTCGAA GGCGAACGGC
GTGTCTGGCG CGGCACGCTA CCAGCAGTAT TCGCTGAAGG AGTCGTACAG CCTGTCGAAG
CGCACGACGC TCTATGCGCT GCAGGCGTAT ACGCATGCGA GCGGACAGAC GCTCGGCGCG
CAAGGCGCCG GCCATATCGT CGACGCGGCA CCGATCGTCG GCGATTCGCA ACAGCTCACG
CCGTCGACGA CGCACGGCCA GTTCGTCGGC ATGGCCGGGA TCGCCGTGAC GTTCTGA
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| Protein sequence | MNAPHYPHYR FAILILSAAS FGAGAAHAQS SVTLYGVVDD SIAYVNNQQG HSNVYLRDGN
LYASKFGLRG DEDLGGGTHA IFDLQAGFNL NTGAQAAAGT IFNRQAYVGL RNDHYGTVTA
GRQYTPYFLL VGPYASSSWL TGATGAHPGD IDGLDTTIRV NNSVTYTSPT LSGLTASAMY
AFGGIAGATG KGNTFSAALR YANGPVGIAA GYLRINSSGS SAGFLNPATA ASGSFAVSVL
NQGYLSAKAV EQVAAAGNYT LGNLTMGLNY SNVKYLPGNG SAFTDTAVFN TYGALAAYRF
TPTFSVAGAF AYTLASKANG VSGAARYQQY SLKESYSLSK RTTLYALQAY THASGQTLGA
QGAGHIVDAA PIVGDSQQLT PSTTHGQFVG MAGIAVTF
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