Gene Bamb_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3562 
Symbol 
ID4312458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp384875 
End bp385723 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID638151404 
Productmethyltransferase type 11 
Protein accessionYP_775450 
Protein GI115358312 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.122272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGA ACCGGGCAAA CGAAGCGCAG TCTGCACTGT GGAACGGTCC GTCGGGGCTT 
GCGTGGGTCG ACGCGCAGCG CTCGCTCGAC CGGATGTTCG AGCCGTTCGA GACACTGCTT
GCGGATGCGG CGGTGGCGGC GTCCGCACGC CGCGTGCTCG ATGTCGGCTG CGGCACCGGC
GCGGTGACGC TCGCGATTGC ACGGCGGCTG GGCGCGCATG CGCACTGTAC GGGTGTCGAC
ATCTCGGCGC GGATGATCGC CGCCGCACAG GCACGCGCCG AGCGCGAGGG CCTCGCCGCC
AGCTTCGTGC CTGCGGATGC GCAGACGCAT GCGTTCGAGC CGGATCAGTT CGACCTGGTC
GTGTCGCGCT TCGGCGTGAT GTTCTTCGAC GATCCGGTGC GCGCGTTCGC GAACCTGCGG
CATGCGGCGC GCGTGAATGC GCAACTGCGA TTCGTCGCAT GGCGCAGCGC CGCTGACAAT
CCGTTCATGA CGACGGCCGA GCGCGTCGCG GGGCCATTGC TCCCGAACCT GCCGGCGCGG
CAGCCGGGCG CGCCGGGACA ATTCGCGTTC GGCGACCGGC AGCGAATCGC GTCGGTATTG
TCGGACAGCG GCTGGGCCGA TATCGCGATC GAGCCGATCG ACGTCGCGTG CGCGTTGCCG
GCGGCCGCGC TGGACGACTA CGTCACCCGA CTGGGGCCGG TCGGGCTCGC GCTTCGGGAA
GTGGATGACG CGACGCGTCG ACGGGTGATC GATACGGTTC GCGCCGCGTT CGAGCAATAC
GTGCAGGGCG CGGATGTACG CTTCGACGCG GCGTGCTGGC TCGTCGCGGC GCGGGCGCCG
TCCGCATGA
 
Protein sequence
MEENRANEAQ SALWNGPSGL AWVDAQRSLD RMFEPFETLL ADAAVAASAR RVLDVGCGTG 
AVTLAIARRL GAHAHCTGVD ISARMIAAAQ ARAEREGLAA SFVPADAQTH AFEPDQFDLV
VSRFGVMFFD DPVRAFANLR HAARVNAQLR FVAWRSAADN PFMTTAERVA GPLLPNLPAR
QPGAPGQFAF GDRQRIASVL SDSGWADIAI EPIDVACALP AAALDDYVTR LGPVGLALRE
VDDATRRRVI DTVRAAFEQY VQGADVRFDA ACWLVAARAP SA